Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq90 114 3e-20
seq107 98.7 2e-15
seq259 86.0 1e-11
>seq90
Length=200924
Score = 114 bits (126), Expect = 3e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 243500 AAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCC 243559
|||||||||| || || || | | |||||||||||| | ||| || | || |||
Sbjct 194475 AAATCATCACCGACGCCGTCGTCATTGAAAAGGAATTCCTGACCGAGGCCCTGCCCTGCG 194534
Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619
|| | ||||||||| | || |||||| |||||||| || || || ||||||||
Sbjct 194535 CCCTGCTCGGCATGAACGCCGATCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGTC 194594
Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679
| | | || || || | || || || ||| ||||| ||||||||||| ||| ||||
Sbjct 194595 TGCTGGTTGCCCTCGGCAACGACAAGGTCTACCGCTCCACGAACCCCTTTGACTTCATGG 194654
Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| ||| ||||| || || || |||||||| || ||||||||
Sbjct 194655 AGAACATCTCGCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGT 194700
>seq107
Length=49618
Score = 98.7 bits (108), Expect = 2e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| |||| || |||||||||||||| || || || | ||
Sbjct 10522 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCATCAGAGTCGACTTGCCGGAACC 10581
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || ||||||||||| || | |||||||||||| | | || | ||| ||
Sbjct 10582 GTTGGGACCGCACAGACCGTAACGCTGGCCACGCTTCAGACGCAGGTGGGTCTGGTTAAG 10641
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || || ||||| || || | ||||||||||||||
Sbjct 10642 CAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTGCAGTTGCACAGATCCTCACC 10695
>seq259
Length=20262
Score = 86.0 bits (94), Expect = 1e-11
Identities = 188/279 (67%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 333714 TCGGGACGCTTCTTC-ACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTT 333772
||||| ||| |||| || ||| | | ||| || || | |||| | |||||| |||
Sbjct 16127 TCGGGCCGCA-CTTCGACAAACGCCGCCAGGTTGCCGTGGTACAGCGCCAGCTTCTTGTT 16069
Query 333773 AGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACAC 333832
| ||||| ||| |||| || || |||| ||||| || |||||| || ||
Sbjct 16068 GGTCTCGTAGTGGTAAATATCAGTCGTCACCTCGTCCAGGAATCCACTGTCGTGAGAAAC 16009
Query 333833 AATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGA 333892
||||| ||| || |||| | | | ||||| | ||||||| | ||||| |
Sbjct 16008 AATCAGCGACGTAATGTCCGGGTGCGTCTTGAGGTAGTTCTCCAGCCACTTGACGTTGGC 15949
Query 333893 CACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGC 333952
||| | |||||||||||||||||| || || || | | || || | ||||| ||
Sbjct 15948 AACATCCAAATGGTTGGTCGGCTCGTCCAGCAGCAGCACGTCGGCCTTTTGCAGCATGGC 15889
Query 333953 ACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
||| || ||||| || ||||| ||||| || || || ||
Sbjct 15888 ACGCGCCAGAGCCAGCTTCATCTTCCAACCACCCGACAG 15850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102872355318350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |