Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq21 298 5e-76 >seq21 Length=78807 Score = 298 bits (330), Expect = 5e-76 Identities = 1087/1675 (65%), Gaps = 46/1675 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| ||||| ||| |||||||| || ||| | || ||| Sbjct 60741 AACTACCAGTACTTTGGCTTCAAGACTCTAGAGCGTTCGTACCTGCTGAAGCTAGACGGC 60800 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || || | || ||| ||| || Sbjct 60801 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATTTGGGGCGAC 60860 Query 93835 -GACATGC-CGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 || || || |||| | | | | || |||| | |||| | ||| | Sbjct 60861 AGAGTTGATCG--TGTTATTGAGACGTACAACCTCATGTCGAGCAAGTTCTTCACCCACG 60918 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-G 93951 || | || || ||||||||||| || || || | | ||| |||| || || ||||| | Sbjct 60919 CCTCGCCCACTCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGG 60978 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 |||| | |||| ||||| ||| || |||| ||| | |||||| ||||| | Sbjct 60979 TTGAC-ATGAAGGAAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATG 61037 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || ||||| ||| |||||| | | ||||||| || || Sbjct 61038 ATCTCCAAGATGGCCGGTGGTATCGGACTCAATGTCCATCGCATCCGTGCCACTGGCTCG 61097 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||| ||||| || ||||||||||| || | || ||||| || || |||||| Sbjct 61098 TACATTGCCGGCACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAAC 61157 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| || ||||| || | | | ||| | || || | || Sbjct 61158 AACACTGCCCGCTACGTCGATCAGGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTAC 61217 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| ||||||||||| ||| | ||| | |||||||| |||||||||||||| Sbjct 61218 CTGGAGCCGTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAG 61277 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || || | ||| | ||||| ||| || || ||| | || ||||| || ||||| Sbjct 61278 GAGGAGGTCCGCGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAG 61337 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || ||||| ||||| | ||||| ||| | || ||||| || || || || ||| | Sbjct 61338 CGTGTTGAGAAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCT 61397 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||| | || | ||||| | |||| | | ||||| | ||||| | | Sbjct 61398 GACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAGGAGGGCCGTGGC 61457 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | | || | || |||||| ||| | || |||| | ||| |||||| Sbjct 61458 CGCGCGTCGATCAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACG 61517 Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | || ||| |||||| | |||| ||| |||| ||||||| || |||| Sbjct 61518 GGCAACCCGTTTATGCTGTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCT 61576 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| || ||||||||||||||| ||||||| | | || || || Sbjct 61577 GGGCACCATCCGCAGCTCCAACCTGTGCACCGAGATTATCGAGTACTGTGCGCCCGATGA 61636 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | |||| || || ||||||| || | ||| | | || || ||| ||||| Sbjct 61637 GGTTGCCGTATGCAACCTGGCTTCGCTGGCTCTGCCGGCGTTTGT-CGA-----CTACA- 61689 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTG 94728 | | | || ||| | || |||| | || | |||| || || Sbjct 61690 -ACAAGAAC-GAGTACGACTTCCAGAAGCTACACGAGGTCAC--CAAGGTTGTTGTGCGC 61745 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||||||||| | | || ||| ||| ||||||||| || ||||| | ||| ||| Sbjct 61746 AACCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCTGAGGCTCACAACAGCAAC 61805 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || || || || | || ||||||||| | || || || | || | || Sbjct 61806 ATGCGCCACCGTCCTATTGGTGTTGGTGTCCAGGGTCTGGCTGATGCTTTCCTGGCGCTG 61865 Query 94849 CGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 || |||| | || || | ||| || || | | || | | || || |||| ||| Sbjct 61866 CGCATGCCTTTTGAGTCGGCCGAGGCTCGCAAG-CTCAACACGCAGATCTTTGAAACCAT 61924 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG---CCACA 94964 || ||| || ||| || | | | |||| ||| || ||| | || Sbjct 61925 CTACCACGCTGCTCTGACGGCCTCGATGGATATTGCCA---AGGA-GGAGGGTACCTACT 61980 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 | | ||| | || |||||| | |||||||| | ||||||||| | ||| ||| Sbjct 61981 CTA--CGTACGAGGGCTCGCCCGTTTCCCAGGGCATCCTGCAGTTCGACATGTGGAATGT 62038 Query 95025 GAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGGT 95082 | ||| | || | |||||| | |||| | | || || | | | |||||| Sbjct 62039 CACTCCCAGCGACCTCTGGGACTGGGTGTCGCTCAAGGAGCAGA--TCAAGCAGCACGGT 62096 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 ||| ||| ||||||| | || |||||||| |||||| |||| ||||||| || ||| Sbjct 62097 GTGCGCAACTCGCTGCTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGC 62156 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||||| ||||| || | ||| |||||| | ||| | | || ||||| || || Sbjct 62157 AACAACGAGTGCTTCGAGCCGTACACTTCCAACATCTACCAGCGTCGTGTGCTGGCTGGC 62216 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261 || |||| || | ||| | | | || || | | || | |||||| ||||| Sbjct 62217 GAGTTCCAGGTTGTTAACCCGTGGTTGTTGCGTGATTTGGTCGAC-CTGGGTCTGTGGTC 62275 Query 95262 TGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || || | ||||||| | |||| | || || || |||||||| || || Sbjct 62276 GGATAACATGAAGAACCGCATCATTGCT----GAGAATGGTTCGGTCCAGAATATTCCTA 62331 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || || |||||||||||||| |||||||| ||||||||||| |||| || Sbjct 62332 GCATCCCTGACGACATCAAGGCGCTGTACAAGACTGTGTGGGAGATTTCGCAACG 62386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719854434360