Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq21 185 9e-42 seq90 143 3e-29 seq13 122 9e-23 seq88 86.0 6e-12 seq131 82.4 8e-11 >seq21 Length=78807 Score = 185 bits (204), Expect = 9e-42 Identities = 748/1161 (64%), Gaps = 67/1161 (6%) Strand=Plus/Minus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||| || || || |||||||| |||| ||| || | | || | ||| |||| Sbjct 62238 ACGGGTTAACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAGATGTTGGAAGTGT 62179 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || || ||| | ||||| ||||| || || || | |||| | || ||||||||| || Sbjct 62178 ACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATGGGCG 62119 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAA 153203 | | || || || || |||| |||||| ||| || | | ||||| | || | ||| Sbjct 62118 CAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGA-TCTGCTCCTTGAGCGACACCCAG 62060 Query 153204 TCCCACAG--CGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGG 153261 ||||| || ||| | || || | |||||||||||| |||| | | || |||| Sbjct 62059 TCCCAGAGGTCGCTG--GGAGTGACATTCCACATGTCGAACTGCAGGATGCC----CTGG 62006 Query 153262 ----CGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTA 153317 |||| ||| | ||||| |||| | || || | ||| | || || | | Sbjct 62005 GAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAATATC-CATCGA 61947 Query 153318 -GCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTC 153376 ||| || || | | ||| |||||||| ||| || | ||||| | || || Sbjct 61946 GGCCGTCAGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAGCTTGCGAGCCTC 61887 Query 153377 TTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGAC 153436 | ||| | |||||||||||| || || || || ||||||||||||| ||| || Sbjct 61886 GGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCCAGACCCTGGACACCAAC 61827 Query 153437 GCCGATGGGTCGATGCTTCTCGTTGC-----TGCGCCTCGCGCTCGCTATGGGATAGTGA 153491 || || || || || | ||||| || ||||| || | ||| ||||| Sbjct 61826 ACCAATAGGACGGTGGCGCATGTTGCTGTTGTGAGCCTCAGGC-----ACGGGGTAGTGG 61772 Query 153492 TTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551 ||| || || || ||| ||||||||||| || || || || | | | | || ||| Sbjct 61771 TTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGTAGCTTC 61712 Query 153552 TCGAAATCATA---GGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGC 153607 | ||| || || | || | | || | || | |||| || || || | || || Sbjct 61711 TGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGC--CG--GCAGAGCCAGCGAAGC 61656 Query 153608 CAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT 153667 ||| || || ||||| ||| |||| | | ||||| | ||||||| ||| ||||| Sbjct 61655 CAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGGTGCACAGGTT 61596 Query 153668 GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAA 153727 | || ||| ||||| || | ||| ||||| ||||| || || ||| ||| | Sbjct 61595 GGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTA 61536 Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT----AAACCTA--TGCAG 153781 ||||| |||| ||| |||||| || | || | || | | || | | | Sbjct 61535 CAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGCTTCTG 61476 Query 153782 GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCG 153841 | ||| | ||| || ||| ||| |||||||| |||||| | |||||||| Sbjct 61475 GGCCT-TGATCG-ACGCGCGGCC----ACGGCCCTCCTGCTCGTACCTTTCGTACAGAGC 61422 Query 153842 CTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGA 153901 ||||||||| |||||||||||||| || ||||| || |||| | || |||||||| | Sbjct 61421 CTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGT 61362 Query 153902 CCACATATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGC 153955 ||| ||| | ||| || || |||||| || || || | ||| ||||| Sbjct 61361 CCA------GTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGC 61308 Query 153956 GTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGAG 154012 | ||||| || || | |||||| ||| | ||||| ||| | || Sbjct 61307 CAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCAAG 61251 Query 154013 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC-- 154070 | | | | | || |||||||| || || | ||| | ||| | |||||| ||| Sbjct 61250 GAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTT 61191 Query 154071 -TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAG 154129 || |||||||||||||||| ||| | | |||||||| || |||| |||||| | Sbjct 61190 GTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGAT 61131 Query 154130 GCCGCTTGCGGTGCCGTTGGT 154150 ||| | | ||| |||||||| Sbjct 61130 ACCGTTGGAGGTACCGTTGGT 61110 >seq90 Length=200924 Score = 143 bits (158), Expect = 3e-29 Identities = 309/453 (68%), Gaps = 17/453 (4%) Strand=Plus/Plus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 ||| |||| |||||||||| ||| ||||||||| | || || || ||| ||||||| Sbjct 194267 GCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCC 194326 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 |||| || | | | | || | |||||||| ||||| || ||||||| || Sbjct 194327 TCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTG 194386 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTG 52571 || |||||||||||||| |||||||| |||||||| ||||| || | ||| | Sbjct 194387 ATTTCGCGCGACGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTC---TCGCAC--- 194440 Query 52572 ACCGAAAAATTGGATTCG-GACACGATC-CTGAG--CATGTTCAAGGAGGCGGTGGCTAT 52627 | ||| || | | | | | || |||| || ||| || || || | || Sbjct 194441 -CTGAACAACCGCCCCAGCAAGAAGCTCGTTGAGGAAATCATCACCGACGCCGTCGTCAT 194499 Query 52628 CGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC 52687 |||||||| || | || | || ||||| || ||||| ||||||||||| | Sbjct 194500 TGAAAAGGAATTCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCT 194559 Query 52688 CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-A 52746 |||| ||||||| |||||||| || || |||||| |||| ||| |||| | | | Sbjct 194560 CATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTC-GGCAACGACA 194618 Query 52747 AGTACTTCAACGCTC--GCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAA 52804 || || | ||||| || || ||||| || ||| | ||||| ||||| | ||||| Sbjct 194619 AGGTCT--ACCGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAA 194676 Query 52805 GACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||| || |||||||| || | ||| || Sbjct 194677 GACCAACTTCTTTGAGAAGCGTGTTGCCGACTA 194709 >seq13 Length=236849 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||||| ||| | || | | | |||||||| || |||||||||||| Sbjct 135354 GCCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 135413 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||| || || ||||| | | |||| |||||||| |||||||| || Sbjct 135414 CAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 135473 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | |||||| | ||||||| Sbjct 135474 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCCGAGGACTCCA 135532 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || ||||| || ||||| |||||||| Sbjct 135533 CCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || || || || || || || | Sbjct 135616 GACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCG 135675 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || |||||||| ||||||||||| || || || ||||| ||| || || | | Sbjct 135676 AAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 135735 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||||||||| | || | || || || || ||||| || Sbjct 135736 TTG-TCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTT 135794 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 135795 GACAAAGATCTGCAT 135809 >seq88 Length=56780 Score = 86.0 bits (94), Expect = 6e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| || ||| || ||||| || || || || | ||| Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| || ||||| || || || || || || ||| || || | ||||| Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 | | |||||| | ||||| ||||||| || | ||| ||||| || || || || || Sbjct 28169 -CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACG 28111 Query 138604 AAAATCTGCAT 138614 ||||||||||| Sbjct 28110 AAAATCTGCAT 28100 >seq131 Length=44026 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||| || ||| || ||||| || || || || | | ||| Sbjct 31459 CCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 31400 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| |||||||| || || || || ||||| ||| || || | | | Sbjct 31399 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 31340 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||| | ||||| ||||| | || | || ||||| ||||| || || || | Sbjct 31339 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 31280 Query 138605 AAATCTGC 138612 || | ||| Sbjct 31279 AACTGTGC 31272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259044025520