Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq180 87.8 1e-12
>seq180
Length=32333
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/210 (70%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 7555 CACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGG 7614
||||| ||| || | | |||||||| || || || ||||| || | ||| || ||||
Sbjct 9222 CACGTAAAACTGCGCAAACATGTGACACGGTGGCAGCGCCATCTTCTTCAAATCCGCCGG 9281
Query 7615 ATTCCACGCGCTCATTATAATGCGACGACTTGTA--GGGTCCTCTT-TGATGGTGCGAAT 7671
||||||||| ||||| || ||||| ||| | ||| | || |||| | | |||| |
Sbjct 9282 ATTCCACGCACTCATGATGATGCGTCGA-TCGTACGGAGTATTCTTCAGCTTGTGC--AC 9338
Query 7672 CACTTGTTGCAATTGGTCGACCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGA 7731
||| | || || ||||| || | | ||| |||||||| | ||| || |||
Sbjct 9339 CACCTCCGCCAGCTGATCGACGCCCTGACCCGTGTAGTCCGTCTGCGCATCGACATACTC 9398
Query 7732 TGCGCCAAAATGCCTCCATTGAAAACCGTA 7761
|||||||||||||| ||| || || |||||
Sbjct 9399 TGCGCCAAAATGCCGCCACTGGAACCCGTA 9428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408240508273976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |