Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq180 87.8 1e-12 >seq180 Length=32333 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 7555 CACGTGAAATTGTACGAGAATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGG 7614 ||||| ||| || | | |||||||| || || || ||||| || | ||| || |||| Sbjct 9222 CACGTAAAACTGCGCAAACATGTGACACGGTGGCAGCGCCATCTTCTTCAAATCCGCCGG 9281 Query 7615 ATTCCACGCGCTCATTATAATGCGACGACTTGTA--GGGTCCTCTT-TGATGGTGCGAAT 7671 ||||||||| ||||| || ||||| ||| | ||| | || |||| | | |||| | Sbjct 9282 ATTCCACGCACTCATGATGATGCGTCGA-TCGTACGGAGTATTCTTCAGCTTGTGC--AC 9338 Query 7672 CACTTGTTGCAATTGGTCGACCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGA 7731 ||| | || || ||||| || | | ||| |||||||| | ||| || ||| Sbjct 9339 CACCTCCGCCAGCTGATCGACGCCCTGACCCGTGTAGTCCGTCTGCGCATCGACATACTC 9398 Query 7732 TGCGCCAAAATGCCTCCATTGAAAACCGTA 7761 |||||||||||||| ||| || || ||||| Sbjct 9399 TGCGCCAAAATGCCGCCACTGGAACCCGTA 9428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408240508273976