Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq90 178 1e-39
seq13 134 1e-26
seq88 114 1e-20
seq131 100 3e-16
>seq90
Length=200924
Score = 178 bits (196), Expect = 1e-39
Identities = 411/611 (67%), Gaps = 25/611 (4%)
Strand=Plus/Plus
Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGAAGCA 47038
||||||| |||| | |||| || ||||| || | |||||| || | |||
Sbjct 194113 CATCCACTCGGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGAGCCTGCCCAGCG 194172
Query 47039 -AGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGG 47097
||| || || || |||| |||| | ||| |||||| | ||| | |||||||| ||||
Sbjct 194173 CAGCTAC-CTGTTCAACGCCATCGACACCATTCCCTGCATCCGCCGCAAGGCCGACTGGG 194231
Query 47098 CCATGAAGTACATT---GAAAACGAAAACGTC-ACTCTGGCCGAACGTTTGATCGCTTTC 47153
|| | |||| ||| || ||| ||| || | ||| | ||| || | || ||
Sbjct 194232 CCCTCAAGTGGATTTCCGATCGCGA----GTCGACCTTTGCCCAGCGTCTGGTGGCCTTT 194287
Query 47154 GCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACC 47213
||| |||||||||| |||||||||||||| |||||| | || || | || |
Sbjct 194288 GCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGGCTGCGCAAG 194347
Query 47214 AAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTG 47273
|| | |||||||| || || ||| ||||||||| || ||| | ||||||||||||
Sbjct 194348 CGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGACGAAGGCCTG 194407
Query 47274 CACACCAACTTTGCCTG---TCTCTACT-ACAACACTAGAGTCGATCAA--AAGTTGGAC 47327
|||||| |||||||||| |||| || || | | | || | | ||| | |
Sbjct 194408 CACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCAGCAAGAAGCTC 194467
Query 47328 GTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCC 47387
|| | || || || | |||| ||||||| |||||| | ||| || | ||
Sbjct 194468 GT--------TGAG-GAAATCATCACCGACGCCGTCGTCATTGAAAAGGAATTCCTGACC 194518
Query 47388 GAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAA 47447
||||| |||||| | | | || |||||||| || | |||| ||||||| ||
Sbjct 194519 GAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGATCTCATGAAGCAGTACATTGAG 194578
Query 47448 TTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAAT 47507
|||||||||||||| ||||| ||| || | |||| | |||| | || |||
Sbjct 194579 TTTGTCGCCGACCGTCTGCTGGTTGCCCTCGGCAACGACAAGGTCTACCGCTCCACGAAC 194638
Query 47508 CCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGC 47567
|| || || || ||| | ||||| ||||| | |||||||||||||| || ||||||||
Sbjct 194639 CCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGT 194698
Query 47568 GTCGGCGAATA 47578
|| | ||| ||
Sbjct 194699 GTTGCCGACTA 194709
>seq13
Length=236849
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||||| || | |||||||| || || || ||||| ||
Sbjct 135583 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135642
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||||| ||| || ||||| || |||||| | |||| |||||||| || |||||
Sbjct 135643 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGA 135702
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||||| | |||| |||||||| ||| ||
Sbjct 135703 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 135762
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || |||||||| ||||| || ||||| ||||||||
Sbjct 135763 TCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||||| || | |||||||| || || || ||||| ||
Sbjct 135811 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135870
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||||| ||| || ||||| || |||||| | ||||| |||||||| || |||||
Sbjct 135871 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGA 135930
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||||| |||| |||| ||| |||| ||||||
Sbjct 135931 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTATCCGACGACTCGAC 135989
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
||||| ||| | || |||||||| || || || ||
Sbjct 135990 TTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 136025
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 135367 CGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCA 135426
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| |||||||| || || || ||||||||||||
Sbjct 135427 TCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 135486
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| |||||||| ||| || || | || |
Sbjct 135487 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATG 135546
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||| ||||| || ||||| ||||||||
Sbjct 135547 GTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 104 bits (114), Expect = 2e-17
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||| | || | |||||||| || || || ||||| ||| |
Sbjct 136095 CCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 136154
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| |||||| |||||||| || |||||
Sbjct 136155 AGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 136214
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| ||| ||||| |||| |||| ||||| | | || ||
Sbjct 136215 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATAGTGTCGGAAGATTCCAC 136273
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCA 127091
|| | ||| | || ||||| ||||
Sbjct 136274 CTCAAGGGTGATGGTCTTGCCCGTCA 136299
>seq88
Length=56780
Score = 114 bits (126), Expect = 1e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| || ||||| ||| || ||||| || |||||| |||||
Sbjct 28287 TTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 28228
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| ||||||||||| || || ||||||||||| ||| ||| || ||||| | |||
Sbjct 28227 AGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 28168
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||||| ||| || |||| ||| | ||| || || || || || || || |||
Sbjct 28167 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 28108
Query 127106 ATCTGCAT 127113
||||||||
Sbjct 28107 ATCTGCAT 28100
>seq131
Length=44026
Score = 100 bits (110), Expect = 3e-16
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| ||||| ||||| ||| || ||||| ||| || ||||| || ||||| |||||
Sbjct 31457 TTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 31398
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| || || || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 31397 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TC 31339
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| ||||||| |||||| || | ||| | || || || ||||| || || || ||
Sbjct 31338 GATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 31279
Query 127105 AATCTGC 127111
| | |||
Sbjct 31278 ACTGTGC 31272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475497584425840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |