Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq21 178 2e-39
seq90 136 5e-27
>seq21
Length=78807
Score = 178 bits (196), Expect = 2e-39
Identities = 830/1300 (64%), Gaps = 31/1300 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||||| ||||| ||||| |||||||| ||||| |||| || || | ||| |
Sbjct 62194 TAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTG 62135
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || |||||||| || | || || |||||| | ||| | | | || | |||
Sbjct 62134 GCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 62075
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081
||||| | ||||||| || | ||| | | | ||| |||| || ||||| ||
Sbjct 62074 TTGAGCGACACCCAGTCCCAGAGGTCGCTGGGAGTGACATTCC-ACATGTCGAACTGCAG 62016
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141
||| || ||||| | ||||| ||||| | || || | ||||| ||| || |
Sbjct 62015 GATGCCCTGGGAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAAT 61956
Query 116142 TTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA- 116197
|| ||| || | || || ||||| || || || ||||| || | | || |
Sbjct 61955 ATCCATCGAGGCCGTC---AGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAG 61899
Query 116198 -TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGA 116256
|||| |||||| | || ||||| | | || | | || |||| || |||
Sbjct 61898 CTTGCGA--GCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCCAGA 61841
Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 116313
|| |||||||| | ||||| || || || | ||| || || |||| ||| |
Sbjct 61840 CCCTGGACACCAACACCAATAGGACGGTGGCGCATGTTGCTGTTGTGAGC---CTCAGGC 61784
Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373
||||| || || || || | | || || || |||||||| ||||
Sbjct 61783 ACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACC 61724
Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433
|| || ||||| | | | || | | | | | | |||| || || || ||
Sbjct 61723 TCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAGAGCC 61664
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
| || ||||| || || || | |||||| || |||||| ||||| || ||
Sbjct 61663 AGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGGTG 61604
Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553
|||| || || || |||||||||| |||||| || || ||| ||||||
Sbjct 61603 CACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGG 61544
Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613
|||||||| |||||| | || | |||||||| || || | || ||||| || | ||||
Sbjct 61543 TCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCAT 61484
Query 116614 A-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672
| | || | | || | | | ||| | | || ||||||| ||||||| || ||| ||
Sbjct 61483 AGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTACAG 61425
Query 116673 GGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731
||||||||||| || || ||| || | || || || || | || || | |
Sbjct 61424 AGCCTCAAACTCCTC-GCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCA 61366
Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791
||| ||| | || |||||| ||||||||||||||||| |||||||| ||||||
Sbjct 61365 GAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCCA 61306
Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851
||| || || || ||| | || || | || || || |||| || | ||||
Sbjct 61305 GGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGT 61246
Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGAC 116908
| | | ||||||||||||||| |||||||| | || | | || ||| |
Sbjct 61245 CAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGC 61186
Query 116909 CAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCAT 116968
| |||| | || || | || || ||| || || || ||||| ||||||||||| |
Sbjct 61185 CGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGT 61126
Query 116969 CAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026
|| || || || || || |||||| | |||| | || |||| |
Sbjct 61125 TGGAGGTACCGTTGGTGCCGGCAATGTACGAGCC--AGTGGCACGGATGCGATGGACATT 61068
Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086
| || ||||| || ||| ||| ||||| || || | ||||| | |||| ||
Sbjct 61067 GAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAAT 61008
Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TG 117145
|| ||||||||||| |||| | | | |||||||| |||| || ||||| |
Sbjct 61007 GCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTG-GGCCTGGG 60949
Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185
| |||||||||||||| || || || | |||||| ||||
Sbjct 60948 GCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAA 60909
>seq90
Length=200924
Score = 136 bits (150), Expect = 5e-27
Identities = 346/522 (66%), Gaps = 11/522 (2%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| || || ||||| || || || || || || || ||| ||||||
Sbjct 194421 GCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCG 194362
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| ||||| ||||| || ||||||||| | ||| | ||| |||||||||||
Sbjct 194361 GGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATG 194302
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---A 127696
||||| || || || || | ||||||| |||||||| |||| ||| |
Sbjct 194301 CCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG---TCGACTCGCGATCGGAA 194245
Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756
| |||||| | ||||| | ||||| ||| || || | ||| | ||| || |
Sbjct 194244 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 194185
Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816
|| || | | | | || || ||||||||| | || ||||| || || ||
Sbjct 194184 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 194125
Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875
|| ||||| | | ||| || | ||| | ||||||| |||| || ||| ||
Sbjct 194124 TCCGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 194066
Query 127876 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 127935
||| ||||| | | ||| | | | ||||| ||||| || || || ||||
Sbjct 194065 CTGGACCTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGC 194006
Query 127936 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 127992
|||||| ||||||| | | ||||| | || |||| || ||||| || | |||||
Sbjct 194005 AAAAAAGGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCA 193946
Query 127993 GTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||| ||||||||| || ||||| | |||||| || |||||
Sbjct 193945 GTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 193904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503051157560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |