Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq21 178 2e-39 seq90 136 5e-27 >seq21 Length=78807 Score = 178 bits (196), Expect = 2e-39 Identities = 830/1300 (64%), Gaps = 31/1300 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||||| |||| || || | ||| | Sbjct 62194 TAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTG 62135 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || |||||||| || | || || |||||| | ||| | | | || | ||| Sbjct 62134 GCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 62075 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||||| | ||||||| || | ||| | | | ||| |||| || ||||| || Sbjct 62074 TTGAGCGACACCCAGTCCCAGAGGTCGCTGGGAGTGACATTCC-ACATGTCGAACTGCAG 62016 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 ||| || ||||| | ||||| ||||| | || || | ||||| ||| || | Sbjct 62015 GATGCCCTGGGAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAAT 61956 Query 116142 TTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA- 116197 || ||| || | || || ||||| || || || ||||| || | | || | Sbjct 61955 ATCCATCGAGGCCGTC---AGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAG 61899 Query 116198 -TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGA 116256 |||| |||||| | || ||||| | | || | | || |||| || ||| Sbjct 61898 CTTGCGA--GCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCCAGA 61841 Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 116313 || |||||||| | ||||| || || || | ||| || || |||| ||| | Sbjct 61840 CCCTGGACACCAACACCAATAGGACGGTGGCGCATGTTGCTGTTGTGAGC---CTCAGGC 61784 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 ||||| || || || || | | || || || |||||||| |||| Sbjct 61783 ACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACC 61724 Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433 || || ||||| | | | || | | | | | | |||| || || || || Sbjct 61723 TCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAGAGCC 61664 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 | || ||||| || || || | |||||| || |||||| ||||| || || Sbjct 61663 AGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGGTG 61604 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||| || || || |||||||||| |||||| || || ||| |||||| Sbjct 61603 CACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGG 61544 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 |||||||| |||||| | || | |||||||| || || | || ||||| || | |||| Sbjct 61543 TCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCAT 61484 Query 116614 A-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | | || | | || | | | ||| | | || ||||||| ||||||| || ||| || Sbjct 61483 AGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTACAG 61425 Query 116673 GGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731 ||||||||||| || || ||| || | || || || || | || || | | Sbjct 61424 AGCCTCAAACTCCTC-GCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCA 61366 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 ||| ||| | || |||||| ||||||||||||||||| |||||||| |||||| Sbjct 61365 GAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCCA 61306 Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 ||| || || || ||| | || || | || || || |||| || | |||| Sbjct 61305 GGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGT 61246 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGAC 116908 | | | ||||||||||||||| |||||||| | || | | || ||| | Sbjct 61245 CAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGC 61186 Query 116909 CAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCAT 116968 | |||| | || || | || || ||| || || || ||||| ||||||||||| | Sbjct 61185 CGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGT 61126 Query 116969 CAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 || || || || || || |||||| | |||| | || |||| | Sbjct 61125 TGGAGGTACCGTTGGTGCCGGCAATGTACGAGCC--AGTGGCACGGATGCGATGGACATT 61068 Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086 | || ||||| || ||| ||| ||||| || || | ||||| | |||| || Sbjct 61067 GAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAAT 61008 Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TG 117145 || ||||||||||| |||| | | | |||||||| |||| || ||||| | Sbjct 61007 GCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTG-GGCCTGGG 60949 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 | |||||||||||||| || || || | |||||| |||| Sbjct 60948 GCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGAA 60909 >seq90 Length=200924 Score = 136 bits (150), Expect = 5e-27 Identities = 346/522 (66%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || || ||||| || || || || || || || ||| |||||| Sbjct 194421 GCAAAGTCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCG 194362 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| ||||| ||||| || ||||||||| | ||| | ||| ||||||||||| Sbjct 194361 GGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATG 194302 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---A 127696 ||||| || || || || | ||||||| |||||||| |||| ||| | Sbjct 194301 CCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG---TCGACTCGCGATCGGAA 194245 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||||| | ||||| | ||||| ||| || || | ||| | ||| || | Sbjct 194244 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 194185 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 || || | | | | || || ||||||||| | || ||||| || || || Sbjct 194184 AACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 194125 Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875 || ||||| | | ||| || | ||| | ||||||| |||| || ||| || Sbjct 194124 TCCGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 194066 Query 127876 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 127935 ||| ||||| | | ||| | | | ||||| ||||| || || || |||| Sbjct 194065 CTGGACCTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGC 194006 Query 127936 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 127992 |||||| ||||||| | | ||||| | || |||| || ||||| || | ||||| Sbjct 194005 AAAAAAGGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCA 193946 Query 127993 GTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| ||||||||| || ||||| | |||||| || ||||| Sbjct 193945 GTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 193904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503051157560