Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq21 174 2e-38
>seq21
Length=78807
Score = 174 bits (192), Expect = 2e-38
Identities = 459/682 (67%), Gaps = 14/682 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| |||||| |||||||| |||| | || | |||| ||||| | | ||| |||||||||
Sbjct 62582 CTGGTCCACAGTGAACTGGATGG-GCGCAGCAGCAG-CCTGCGTACGCAGGTAGTACATG 62525
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || ||| || ||| ||| | ||||||| | | |||| || |
Sbjct 62524 CCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTGGTAATCTTGCCCATAGTA 62465
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
||||| |||||| ||||| || ||||| |||||||| |||||| || || || ||
Sbjct 62464 GGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGAT-AAAGGCACCACGGTCAGC 62406
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074
||||| | | || || ||||||||||||||||| |||||| ||| || || ||
Sbjct 62405 AGCCATCTGCACAACCGTACGTTGCGAAATCTCCCACACAGTCTTGTACAGCGCCT-TGA 62347
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
||| | ||| | || | | ||| | ||| || || || || || | | ||
Sbjct 62346 TGTCGTCAGGGATG-CTAGGAATATTCTGGACCGAACCATTCTCAGCAATGATGCGGTTC 62288
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | ||| ||||| |||| || || || |||| || ||||| |
Sbjct 62287 TTCATGTTATCCGACCACAGACCCAGGTCGACCAAATCACGCAACAACCACGGGTTAACA 62228
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | |||||| | || | | | |||| ||| | || |||||
Sbjct 62227 ACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAGATGTTGGAAGTGTACGGCTCGAAG 62168
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|||||||||||| | |||||| | ||||||||||| |||||||| || || |||||
Sbjct 62167 CACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATGGGCGCAAGCAGCAGC 62108
Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
|||||||||||||||| | | || |||| ||| || || |||||| | |
Sbjct 62107 GAGTTGCGCACACCGTGCTGCTTGA-TCTGCTCCTTGAGCGACACCCAGTCCCAGAGGTC 62049
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
||||| | || ||||||||||||||| | |||||| || || || |||||
Sbjct 62048 GCTGGGAGTGACATTCCACATGTCGAACTGCAGGATGCCCTGGGAAACGGGCGAGCCCTC 61989
Query 204433 GTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTGAT 204491
|||||| | || | ||||| | || || | || |||||| | || || |
Sbjct 61988 GTACGTAGAGTAGGTACCCTCCTCCT-TGGCAATATCCATCGAGGCCGTCAGAGCAGCGT 61930
Query 204492 AGTACATGGTCTCAAAGATCTG 204513
||| ||||| |||||||||||
Sbjct 61929 GGTAGATGGTTTCAAAGATCTG 61908
Score = 123 bits (136), Expect = 4e-23
Identities = 458/695 (66%), Gaps = 27/695 (4%)
Strand=Plus/Minus
Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||||||||||| ||||||||||| ||| ||||| |
Sbjct 61579 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTACAGCATAAACGGGTTG 61520
Query 204983 CCGTTCTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCT----CCACTTG 205038
|| |||| |||||| ||||||| | ||| | | | |||| | || |
Sbjct 61519 CCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGCTTCTGGGCCTTGATCGACGCG 61460
Query 205039 CTTC-ACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGT 205097
| | ||| | ||| || |||||| || |||||| ||| |||| || ||||
Sbjct 61459 CGGCCACGGCCCTCC--TG---CTCGTACCTTTCGTACAGAGCCTCAAACTCCTCGCCGT 61405
Query 205098 ACACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTT 205157
| ||| ||| || || || | ||||| |||||||||| ||| || || ||||
Sbjct 61404 AGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAG-TCCGAGT-TCTT 61347
Query 205158 -TCACC-CTCTCCATAAACAGGTCGCTGATCCACAG-GCCGTAAAACAGATCACGGGCCC 205214
||| | | || ||| || ||||| ||||||||| ||| ||| || |||||||| |
Sbjct 61346 CTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCCAGGAAA-AGGTCACGGGCGC 61288
Query 205215 TAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGC 205273
| | || | || ||||||| || ||| || ||| | | | || ||||||
Sbjct 61287 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGG-AAGTCAAACACATCCGCGTGC 61229
Query 205274 CACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATG 205333
|||||||| | | | ||| | || || || | |||||| || ||||| || || |
Sbjct 61228 CACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAG 61169
Query 205334 CGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTG 205393
|| | | |||||| || |||||||| || | | |||||||| ||| ||||| |||
Sbjct 61168 CGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTGGTG 61109
Query 205394 CTGTTGATGGCCGAGCCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAG 205451
| | ||| |||||| || | | || |||| || | || || || || |
Sbjct 61108 CCGGCAATGTACGAGCCAGTGGCACGGATGCGATGGACATTG--AGTCCGATACCACCGG 61051
Query 205452 AACACTTGGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCG 205510
||||| |||| || | | ||||| ||||| ||| ||||| |||| || ||
Sbjct 61050 CCATCTTGGAGATCATAGCACAAGTCTTG-AGAGTATCGTAAATGCCCTCGATCGAGTCT 60992
Query 205511 TCCGCCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAA 205569
||| || |||| ||||| |||| || | ||||| ||| | || || |||| |||
Sbjct 60991 TCCTTCA-TGTCAACCAGGAAGCAAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAA 60933
Query 205570 GAGCGTGGGGCTGGCGTGGCTGAAGCGCTT-CTCG 205603
|| ||||| ||||||| ||||| ||| ||||
Sbjct 60932 CAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTCG 60898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795149822762960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |