Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq90 345 4e-90
seq13 125 7e-24
seq88 100 3e-16
seq131 91.5 1e-13
>seq90
Length=200924
Score = 345 bits (382), Expect = 4e-90
Identities = 575/824 (70%), Gaps = 15/824 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|||||||| || || || || || ||| || ||| | ||| || || ||||||||
Sbjct 194694 TTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTC 194635
Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | | |||| |||| |||||| || | || ||||| | |||||| || |||
Sbjct 194634 GTGGAGCGGTAGACCTTGTCGTTGCCGA---GGGCAACCAGCAGACGGTCGGCGACAAAC 194578
Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800
|| ||||| ||| |||| ||| || | || ||||| |||| ||||| || ||
Sbjct 194577 TCAATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGCAGGGCGCAG-GGCAGGGCCTC 194519
Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
||| || || | || ||| |||| |||||||||| ||||||| |||| || |
Sbjct 194518 GGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATTTCCTCAACGAGCTTCTT 194459
Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
||| || || | || ||| ||| | || ||| ||||||||| |||| ||| ||
Sbjct 194458 GCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTC 194399
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
||| | ||||| || |||||| || |||| |||||||| || || || || ||
Sbjct 194398 GTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCACGCTTGCGCAG 194339
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || |||| ||| || |||||| ||||||| |||||||||||| || || |||||
Sbjct 194338 CCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCCAC 194279
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
||| |||| | | || || | || || ||||| || ||||| ||||||||
Sbjct 194278 CAGACGCTGGGCAAAGGTCGACTCGCGATCGGAAATCCACTTGAGGGCCCAGTCGGCCTT 194219
Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160
|| ||| || || || ||||||||||| |||| | || | | || |||
Sbjct 194218 GCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAG--GTAGCTGCGCTGGGCAGGC 194161
Query 133161 ACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCG 133218
| | ||| ||||||||||| ||| ||| | |||||||| | ||||||||| |
Sbjct 194160 TCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATG 194101
Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278
|| || |||||||| ||||| || |||||| | ||| || || | |||||||||
Sbjct 194100 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAGAAACGCTCA 194041
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
||||| || |||||||| |||||||| ||| || ||||||||||| |||||| ||||
Sbjct 194040 ACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACGTGCGAGATG 193981
Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395
|||| ||| | | ||||| ||| | ||||||| | ||||||||||| ||
Sbjct 193980 AAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCA 193921
Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||||| | ||||| || ||||||||||| || ||||||||
Sbjct 193920 ATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACAT 193877
>seq13
Length=236849
Score = 125 bits (138), Expect = 7e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| |||||||| | || || ||| || |
Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| |||||| | |||||
Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || || || |||||||| || | ||||| || ||||||||||
Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||| ||||| |||| ||||| |||| |||||| || | |||||||
Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGGCC 135353
Score = 122 bits (134), Expect = 9e-23
Identities = 154/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310
|| |||| || || ||||| ||||| ||||||||| |||| |||||| | | || | |
Sbjct 136030 TAGTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAAGTCGAGTCGTCGGATACCA 135971
Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369
| | |||| | || || |||| ||||| ||||| ||||| | ||||| |||||
Sbjct 135970 TCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGT 135912
Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429
| |||| ||| ||||| ||||| || || | ||||| ||| ||||||||||||||
Sbjct 135911 TTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATCCAG 135852
Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| | || ||||| ||||||||||
Sbjct 135851 AAGGAGTCTACTCTGCACCTGGTGCTGCG 135823
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| |||||||| | || || ||| || |
Sbjct 135809 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135750
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 135749 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 135690
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 135689 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAAC 135630
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| ||||||||||
Sbjct 135629 ATCCAGAAGGAGTCTACTCTGCACCTGGTGCTGCG 135595
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|||||||| ||||||||| | || || || | |||||| | | |||| | ||
Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACG-TCAAGTC 136239
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| ||||| || || | ||||| ||||| || || | || || ||
Sbjct 136238 GAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAA 136179
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||||||| || | ||||| || ||||||||||||||| ||||| | || || ||
Sbjct 136178 GCAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 136119
Query 38447 TTTGGTGCTGCGT 38459
| |||||||||
Sbjct 136118 CCTTGTGCTGCGT 136106
>seq88
Length=56780
Score = 100 bits (110), Expect = 3e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || ||||| || || || ||| |||| || ||| ||
Sbjct 28097 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 28156
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || || |||| || || ||||| |||||| | ||
Sbjct 28157 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 28216
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | ||||| || |||||||
Sbjct 28217 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 28276
Query 38421 AACATCCAAAAGG 38433
|||||||| ||||
Sbjct 28277 AACATCCAGAAGG 28289
>seq131
Length=44026
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| | || |||||| || | |||| |
Sbjct 31279 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 31338
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| ||
Sbjct 31339 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 31397
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | || ||||| ||||| || || | ||||| || |||||||||||| || ||
Sbjct 31398 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAA 31457
Query 38432 GG 38433
||
Sbjct 31458 GG 31459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500169417581440
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