Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq90 345 4e-90 seq13 125 7e-24 seq88 100 3e-16 seq131 91.5 1e-13 >seq90 Length=200924 Score = 345 bits (382), Expect = 4e-90 Identities = 575/824 (70%), Gaps = 15/824 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 |||||||| || || || || || ||| || ||| | ||| || || |||||||| Sbjct 194694 TTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTC 194635 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | | |||| |||| |||||| || | || ||||| | |||||| || ||| Sbjct 194634 GTGGAGCGGTAGACCTTGTCGTTGCCGA---GGGCAACCAGCAGACGGTCGGCGACAAAC 194578 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800 || ||||| ||| |||| ||| || | || ||||| |||| ||||| || || Sbjct 194577 TCAATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGCAGGGCGCAG-GGCAGGGCCTC 194519 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||| || || | || ||| |||| |||||||||| ||||||| |||| || | Sbjct 194518 GGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATTTCCTCAACGAGCTTCTT 194459 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| || || | || ||| ||| | || ||| ||||||||| |||| ||| || Sbjct 194458 GCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTC 194399 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | ||||| || |||||| || |||| |||||||| || || || || || Sbjct 194398 GTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCACGCTTGCGCAG 194339 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| ||| || |||||| ||||||| |||||||||||| || || ||||| Sbjct 194338 CCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCCAC 194279 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| |||| | | || || | || || ||||| || ||||| |||||||| Sbjct 194278 CAGACGCTGGGCAAAGGTCGACTCGCGATCGGAAATCCACTTGAGGGCCCAGTCGGCCTT 194219 Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160 || ||| || || || ||||||||||| |||| | || | | || ||| Sbjct 194218 GCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAG--GTAGCTGCGCTGGGCAGGC 194161 Query 133161 ACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCG 133218 | | ||| ||||||||||| ||| ||| | |||||||| | ||||||||| | Sbjct 194160 TCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATG 194101 Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278 || || |||||||| ||||| || |||||| | ||| || || | ||||||||| Sbjct 194100 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAGAAACGCTCA 194041 Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || |||||||| |||||||| ||| || ||||||||||| |||||| |||| Sbjct 194040 ACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACGTGCGAGATG 193981 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395 |||| ||| | | ||||| ||| | ||||||| | ||||||||||| || Sbjct 193980 AAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCA 193921 Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| | ||||| || ||||||||||| || |||||||| Sbjct 193920 ATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACAT 193877 >seq13 Length=236849 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| | || || ||| || | Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| |||||| | ||||| Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || |||||||| || | ||||| || |||||||||| Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| |||| ||||| |||| |||||| || | ||||||| Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGGCC 135353 Score = 122 bits (134), Expect = 9e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||| ||||| ||||||||| |||| |||||| | | || | | Sbjct 136030 TAGTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAAGTCGAGTCGTCGGATACCA 135971 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | || || |||| ||||| ||||| ||||| | ||||| ||||| Sbjct 135970 TCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGT 135912 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 | |||| ||| ||||| ||||| || || | ||||| ||| |||||||||||||| Sbjct 135911 TTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATCCAG 135852 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| | || ||||| |||||||||| Sbjct 135851 AAGGAGTCTACTCTGCACCTGGTGCTGCG 135823 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| | || || ||| || | Sbjct 135809 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135750 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| ||||| | ||||| Sbjct 135749 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 135690 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 135689 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAAC 135630 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || ||||| |||||||||| Sbjct 135629 ATCCAGAAGGAGTCTACTCTGCACCTGGTGCTGCG 135595 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 |||||||| ||||||||| | || || || | |||||| | | |||| | || Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACG-TCAAGTC 136239 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| ||||| ||||| || || | ||||| ||||| || || | || || || Sbjct 136238 GAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAA 136179 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||||||| || | ||||| || ||||||||||||||| ||||| | || || || Sbjct 136178 GCAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 136119 Query 38447 TTTGGTGCTGCGT 38459 | ||||||||| Sbjct 136118 CCTTGTGCTGCGT 136106 >seq88 Length=56780 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || || ||| |||| || ||| || Sbjct 28097 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 28156 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || || |||| || || ||||| |||||| | || Sbjct 28157 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 28216 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||| Sbjct 28217 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 28276 Query 38421 AACATCCAAAAGG 38433 |||||||| |||| Sbjct 28277 AACATCCAGAAGG 28289 >seq131 Length=44026 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| | || |||||| || | |||| | Sbjct 31279 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 31338 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| || Sbjct 31339 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 31397 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | || ||||| ||||| || || | ||||| || |||||||||||| || || Sbjct 31398 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAA 31457 Query 38432 GG 38433 || Sbjct 31458 GG 31459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169417581440