Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq101 217 2e-51 seq273 190 3e-43 seq541 98.7 1e-15 >seq101 Length=191744 Score = 217 bits (240), Expect = 2e-51 Identities = 532/800 (67%), Gaps = 35/800 (4%) Strand=Plus/Minus Query 7007 CCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGG 7066 |||| ||||| | ||| |||| ||||| | || ||||| ||||| |||||||||||| Sbjct 128286 CCTT-ACCCGACAGGATACCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCATCGGGG 128228 Query 7067 TTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTC 7126 || || | || | ||| | || ||||| || | || || | || | || || || Sbjct 128227 TTGATGGACTTCTCCAGCTTCTTGCCGTTGAAGAAGTCAGACAGCAGCTTCTGGATCTTG 128168 Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA----- 7181 ||||| || || || |||||||||| ||||| |||| || | | || |||| Sbjct 128167 GGGATACGGGTGGAACCACCGACCAGGACGATCTCATCGACCTGCTTCTTCTCGAGGCCA 128108 Query 7182 ---TCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCA 7238 || || || ||| | | || || |||| | | ||| | || Sbjct 128107 GCGTCCTTCAGGACCGAGG--------CAACGGGGTCCAGAGTGCCAGCGAA---GGCCT 128059 Query 7239 TACA---CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTC 7293 | | ||| ||||| ||||| |||||||| || || | || || || | ||||| Sbjct 128058 TGGAGTTCAGCTCCTCGAAACGGGCACGGGTGATC--TGGACAGTGAAGTCCTCACCGTC 128001 Query 7294 GTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCG 7353 | | | | ||||| |||||||| || || || ||||| | || ||||| || || Sbjct 128000 GAAGAGAGTGTCAATCTCAATGGTGGTCTGAGCACCGGAAGACAGGGTACGCTTGGCACG 127941 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATG 7413 |||||| || || || | |||||| |||||||| | | ||| || | ||| ||||| Sbjct 127940 CTCACAAGCGGTACGGAGACGACGCAGGGCACGGGCATCACCAGACAGATCCTTCTTGGT 127881 Query 7414 TTTACGTTTAAACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCAC 7472 || || | || || | | ||| ||| | | || | | |||||||| | ||||| Sbjct 127880 CTTGCGGGTGAAGTCCTTCTTGCAGTAGTCCA-GCAGGTTGGTGTCGAAATCCTGACCAC 127822 Query 7473 CCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACA 7532 ||| ||| || || || ||||| || ||||| |||| ||| || | |||||| | || Sbjct 127821 CCAGGTGAGTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGAATGTTCAGCA 127762 Query 7533 ACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT 7592 || ||||| || |||||||||||||| || | || || ||||| || | ||| Sbjct 127761 GGGAGACATCGAAAGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCCG 127702 Query 7593 TGTTCTTATCG---AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | | |||||||| |||||||| || || || || || || || ||||| | Sbjct 127701 ACTTACCAGCACCCAGACCGTAGGCGATAGCAGCGGCAGTAGGCTCGTTGATGATACGCA 127642 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 || ||||||||||||||| | | || || || || || || || || ||||| | Sbjct 127641 GAACGTTCAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGA 127582 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 ||||||| ||||| || | ||| || | | ||| ||||| |||| | | || |||| Sbjct 127581 AGTAGGCGGGGACAGTGATGACAGCCTTCTCGACCTTCTTGCCGATCTTGGCCTCAGCGA 127522 Query 7770 TATCTTTCAT---TTTGGTA 7786 | || ||||| ||||||| Sbjct 127521 TCTCCTTCATCTGTTTGGTA 127502 >seq273 Length=18612 Score = 190 bits (210), Expect = 3e-43 Identities = 281/398 (71%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||| ||| ||||| || ||||| | ||||| || |||||||| | ||| Sbjct 14878 TCCTCACCACCCAGGTGGGTATCACCAGCGGTGGACTTGACCTCGAAGATACCATCCTCA 14937 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | || || ||||| || |||||||||||||| || || || || ||||| Sbjct 14938 ATGGTCAGCAGAGAGACATCGAAGGTACCACCACCCAGATCGAAGATCAGGACGTTGCGC 14997 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 ||| | || ||||| || |||||||| || || || || || || || || || || Sbjct 14998 TCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTGATG 15057 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 ||||| ||| ||| || || |||||| | || || || || || || || || ||| Sbjct 15058 ATACGCAGAACGTTAAGACCGGCAATAAGACCGGCGTCCTTGGTGGCCTGACGCTGAGAA 15117 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 ||||| ||||| || || || || ||||| |||| | | | |||| || ||||| Sbjct 15118 TCGTTGAAGTAAGCGGGAACAGTGACGACAGCGTTGTTAATGCTGGTACCCAGGTACGAC 15177 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || ||| | || ||| ||| || ||||| || || ||||| |||| | ||||| Sbjct 15178 TCAGCGGTCTCACGCATCTTGACCAGGACCATGGAGGAGATCTCCTCAGGAGTGAACTGC 15237 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 || || ||||| || || || || | ||| ||||| || Sbjct 15238 TTGGTCTCACCCTTGAACTCGACCTGAATGATGGGCTT 15275 >seq541 Length=93945 Score = 98.7 bits (108), Expect = 1e-15 Identities = 223/336 (66%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || |||||||||| ||| || || || ||||| ||||| ||||| | ||| Sbjct 7921 ATCAAAGTCCTCACCACCCAGGTGGGTGTCACCGTTGGTCGACTTGACCTCAAACACACC 7862 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || | | | ||| | ||| || |||||||||||||| || | | | || Sbjct 7861 AGACTGGATCTCCAGAACCGAGATATCGAAGGTACCACCACCCAGATCGTAGACGGCGAC 7802 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || ||| | ||| || |||||||| || | ||| || || || || || Sbjct 7801 ------AACGCGGTCAGCCTCCTTCTCCAGACCGTAGGCCAGAGCAGCGGCAGTAGGCTC 7748 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | || ||| || ||||||||||| ||| | || || || || || || || Sbjct 7747 GTTGACAACACGCAGGACGTTCAGGCCAGAAATCTGACCGGCGTCCTTGGTGGCCTGACG 7688 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || ||||| |||||||| || || || ||||| |||| | |||| ||| || Sbjct 7687 TTGGGAGTCGTTGAAGTAGGCGGGAACGGTAACGACAGCGTTCTTGACGGGCTTGGACAG 7628 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 || | || ||| | || ||||| ||| | || || Sbjct 7627 GTAAGCCTCGGCGGTCTCCTTCATCTTGTTCAGGAC 7592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128504914440