Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq21 214 2e-50 seq90 89.7 6e-13 >seq21 Length=78807 Score = 214 bits (236), Expect = 2e-50 Identities = 897/1398 (64%), Gaps = 41/1398 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGA-AGATATTGATTCTGT 111670 || ||| ||||| | ||||| || || | || || || || ||| ||||| ||| Sbjct 60816 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATTTGGGGCGACAGAG-TTGATCGTGT 60874 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | | ||||| ||| || ||||| | | |||| |||||| | || || || || Sbjct 60875 TATTGAGACGTACAACCTCATGTCGAGCAAGTTCTTCACCCACGCCTCGCCCACTCTGTT 60934 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| || |||| |||| ||| ||||| ||| | ||||| || Sbjct 60935 CAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGGTTGACATGAAGGAAGA 60994 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | |||||||||| ||||||| ||||| ||||| ||| ||| || Sbjct 60995 CTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGGCCGG 61054 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 ||||||||| | | ||||| || | |||| | |||||| || || || Sbjct 61055 TGGTATCGGACTCAATGTCCATCGCATCCGTGCCACT--GGCTCGTACATTGCCGGCACC 61112 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| || | ||||| ||||| ||||| || || || ||| ||| || ||||| Sbjct 61113 AACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCTAC 61172 Query 111969 GTAAACCAAGCTGGGCGTCG-CAAGGGATCTA------TCGCAGTCTATCTTGAGCCATG 112021 || | || ||||| | |||| | || | || | || || ||||| || Sbjct 61173 GTCGATCA----GGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTG 61228 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||||||| | | || |||||||| |||| ||||| || | ||||||| || Sbjct 61229 GCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 61288 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || || ||| || || ||||| || || |||||||||||| | |||||| | Sbjct 61289 CGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGTGTTGAGAA 61348 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || | ||| |||| | || || || || || || || | || | || Sbjct 61349 GAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTACGG 61408 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGG 112260 ||||||||||| || || ||| || ||||||| | || | || ||| | ||| || Sbjct 61409 CGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAGGAGGGCCGTGGCCGC-GCGTCGA 61467 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | | || | || | | ||| | || ||||| || |||| |||||||| || | || Sbjct 61468 T-CAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACGGGCAACCCG 61526 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | |||||| ||||| ||| |||||||| ||||| || || ||||| |||| ||| Sbjct 61527 TTTATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATC 61586 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || |||||||| || || || || | || | | |||||| || || Sbjct 61587 CGCAGCTCCAACCTGTGCACCGAGATTATCGAGTACTGTGCGCCCGATGAGGTTGCCGTA 61646 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGA 112498 || ||||| || || | ||||| || || ||| || | || | || || | || Sbjct 61647 TGCAACCTGGCTTCGCTGGCTCTGCCGGCGTTTGTCGACTACAACAAGAACGA-GTACGA 61705 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | | || || ||||| || || || ||| ||||| ||| | | ||||| Sbjct 61706 CTTCCAGAAGCTACACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCATTGA 61765 Query 112559 TAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 112615 || |||||||| |||| |||| || || ||| | |||||||| || Sbjct 61766 CGTCAACCACTACCCCGTGCCTGAG---GCTCACAACAGCAACATGCGCCACCGTCCTAT 61822 Query 112616 TGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTT 112670 |||| | |||||||| ||||| || |||| ||| || ||| |||| ||| Sbjct 61823 TGGTGTTGGTGTCCAGGGTCTGGCTGATGCTTTC-----CTGGCGCTGCGCATGCCTTTT 61877 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || | ||| || | |||| ||| || ||||| || || || ||||| ||| Sbjct 61878 GAGTCGGCCGAGGCTCGCAAGCTCAACACGCAGATCTTTGAAACCATCTACCACGCTGCT 61937 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || ||| ||| | || ||| || ||| | || || | ||||| || Sbjct 61938 CTGACGGCCTCGATGGATATTGCCAAGGAGGAGGGTACCTACTCTACGTACGAGGGCTCG 61997 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTA 112849 || | ||| || || | || || || || |||| |||| || | || ||| | || Sbjct 61998 CCCGTTTCCCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACTCCCAGCGACCTCTG 62056 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 ||||||| | |||||||| | |||||| || | ||| | || ||| || || | Sbjct 62057 GGACTGGGTGTCGCTCAAGGAGCAGATCAAGCAGCACGGTGTGCGCAACTCGCTGCTGCT 62116 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| || ||| ||| | || || |||| || || || ||||| || || Sbjct 62117 TGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCC 62176 Query 112970 CTACACGACGAACATCTA 112987 ||||| | |||||||| Sbjct 62177 GTACACTTCCAACATCTA 62194 >seq90 Length=200924 Score = 89.7 bits (98), Expect = 6e-13 Identities = 195/288 (68%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106 ||||| |||| ||| || ||||| ||| || | ||| | || || | |||||| | Sbjct 194138 CTCATCGACACGTACATCAAGGAGCCTGCCCAGC-GCAGCTACCTGTTCAACGCCATCGA 194196 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAA 102163 || |||| || || | || || || ||||| | |||||| || ||| | Sbjct 194197 CACCATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTTCCGATCGCGA 194256 Query 102164 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 |||| ||||||| |||| || | || ||||| || ||||| ||||||||||| Sbjct 194257 GTCGA---CCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTC 194313 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 || |||| | | |||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct 194314 GGGCGCCTTTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTT 194373 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| || || || ||||| || || ||| || ||||| Sbjct 194374 TTCCAACGAGCTGATTTCGCGCGACGAAGGCCTGCACACCGACTTTGC 194421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738202229520