Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq21 156 5e-33 seq520 87.8 2e-12 >seq21 Length=78807 Score = 156 bits (172), Expect = 5e-33 Identities = 632/984 (64%), Gaps = 25/984 (3%) Strand=Plus/Minus Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC-GTCGA 110160 |||| || |||||||| ||||| | |||||| || || || |||||| || || | Sbjct 61851 CATCAGCCAGACCCTGGACACCAACACCAATAGGACGGTGGCGCATGTT---GCTGTTGT 61795 Query 110161 GCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || || |||||||| |||| ||| |||| || || || || | ||| Sbjct 61794 G-AGCCTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACA 61736 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATAT 110277 ||| |||| || || || || | | | ||| || ||| | | | | |||| | Sbjct 61735 ACCTTGGTGACCTCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAAC 61676 Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337 || ||||| | || || || ||||| || | | ||| || | ||| || Sbjct 61675 GCCGGCAGAGCCAGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCG 61616 Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397 | ||| || || |||| |||||| || ||| |||| ||||||||| || ||| Sbjct 61615 ATAATCTCGGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTG 61556 Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457 ||| || ||||| || ||||| | ||| | || || || ||||| | || ||| Sbjct 61555 CGGTTACAGTGGTCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGA 61496 Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA 110516 ||||| | ||||| | || | ||| || | ||| | | || |||| |||||| Sbjct 61495 ATGGCGTACCATAGCTTCTG-GGCCTTGATCGACGCGCGGCCACGGCCCTCCTGCTCGTA 61437 Query 110517 CTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTC 110576 | | ||||| ||||||| |||| ||||| |||| || || || || Sbjct 61436 CCTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTT 61377 Query 110577 GGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAAT 110636 ||| || | || | ||| | || |||||| | ||||||||| |||||||| || Sbjct 61376 GGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGAT 61317 Query 110637 CCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAG 110696 ||||| |||| ||||||||||||| || |||| || | || ||||| ||| || Sbjct 61316 CCACAGCGCCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAG 61257 Query 110697 CTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTT 110756 || | ||||| | | ||||| |||||| || || || || | || | || || Sbjct 61256 GTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACC--- 61200 Query 110757 ACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810 | | || || |||| | || ||||| || ||| ||||| || | ||||| Sbjct 61199 AGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCAT 61140 Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAAT 110870 ||||| || || | ||| ||| || || || ||| || | ||||||| || Sbjct 61139 GGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCAGTGGCACGGAT 61080 Query 110871 GTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGA 110929 | |||| || | || |||||||| ||| ||| || |||| | ||| ||| Sbjct 61079 GCGATGGACATTGAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCT-TGA 61021 Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989 | ||| | ||||| || || ||||| ||| |||| || ||| || |||||||| |||| Sbjct 61020 GAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACA 60961 Query 110990 TCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT 111049 ||| | | ||||| || || ||||| || || || | || || ||| ||| ||| Sbjct 60960 GCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGA--AGAACTT 60903 Query 111050 G--GGACATCTTGTTGTATGTGTC 111071 | ||||| |||||| || || Sbjct 60902 GCTCGACATGAGGTTGTACGTCTC 60879 >seq520 Length=268042 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| || || | |||||||| || |||||||| ||| | ||||| |||| | | | Sbjct 8164 GAACAGCTCTCTCACACGCTTGGCACCAACACCAACGTAGATCTCGTCGAACTCGGAACC 8223 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 ||| | | ||||| ||| || |||||||||| || || || | || ||||| Sbjct 8224 AGACATGTAGAAAAAGGGGACACCAGCTTCACCAGCGACAGCACGGGCCAAAAGGGTCTT 8283 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT--TCCA 11913 || ||||| || | |||| | || | | | || ||| | ||| ||||| || | Sbjct 8284 GCCGGTACCGGGAGGACCAACAAGCAAGACACCCTTGGGCAGCTTTCCACCAAGAGTCGA 8343 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | || || |||||||||||||| |||| ||||| |||||||||||||| Sbjct 8344 AA--ACTTGTCGGGGTTCTTGAGGAAGTCAACAAGCTCCTGCAGTTCCTCCTTGGC 8397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972017049800