Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq21 201 1e-46 >seq21 Length=78807 Score = 201 bits (222), Expect = 1e-46 Identities = 902/1403 (64%), Gaps = 51/1403 (4%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | ||||| || || ||||| || || || |||| || || | ||| | Sbjct 62194 TAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTG 62135 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | || || ||| || | ||| | | |||||| | ||| Sbjct 62134 GCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 62075 Query 106055 TTGAGA-ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 ||||| ||| ||||||| || | ||| || | || |||| |||| || || || | Sbjct 62074 TTGAGCGACA-CCCAGTCCCAGAGGTCGCTGGGAGTGACATTCC-ACATGTCGAACTGCA 62017 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | || ||||| ||| || ||||| | || |||| ||| | | | || | Sbjct 62016 GGATGCCCTGGGAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAA 61957 Query 106173 ATTCACAGCTCG-CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 || || | | || ||| | ||||| || |||||||||||||| | | || | | Sbjct 61956 TATC-CATCGAGGCCGTCAGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAGC 61898 Query 106232 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 106286 | || || | || ||||| |||| |||| || ||| |||| || | Sbjct 61897 TTGCGAGCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAG-----CATCAGCCA 61843 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345 |||| || ||||| | ||||||||| | ||| ||||| || || | | | || |||| Sbjct 61842 GACCCTGGACACCAACACCAATAGGACGGTGGCGCATGTTG--CTGTTGTG-AGCCTCAG 61786 Query 106346 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||||| || || |||||||| ||||| || || ||||| ||| |||| Sbjct 61785 GCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGA 61726 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463 || || || || | | || | | | | | | |||| || || || | Sbjct 61725 CCTCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAGAG 61666 Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523 | | || |||| ||||| || || |||||| | |||||| | ||| || | Sbjct 61665 CCAGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGG 61606 Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583 | |||| |||||| || || || |||| ||||| ||||| ||||| ||| || Sbjct 61605 TGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGT 61546 Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643 |||||||| ||||| | || | |||||||| ||||| | || ||||| || | || Sbjct 61545 GGTCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACC 61486 Query 106644 ACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702 | | | || | | || | | | | || | | || |||||| ||||||| || ||| Sbjct 61485 ATAGCTTCTGGGCCTTGATCGACG-CGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTAC 61427 Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762 || || ||||||||||| || ||| | || || || || || || || | Sbjct 61426 AGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATC 61367 Query 106763 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-- 106820 |||| ||| | || |||||| ||||||||||| ||||| || |||||||| | Sbjct 61366 AGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCC 61307 Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | |||| || || | || |||| || | || ||||| || | ||||||| Sbjct 61306 AGGAAA--AGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGA 61249 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTT-T 106933 | || | | |||||||||||| ||||| || || | || | || | ||| | Sbjct 61248 AGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGT 61189 Query 106934 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 | ||||| |||| || ||||| || ||| ||| || || || ||||| ||||| Sbjct 61188 TGCCGCCC----TGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATG 61133 Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCAT 107051 ||||| | || ||| || || || || |||||| | |||| | | || Sbjct 61132 ATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAG--CCAGTGGCACGGATGCGAT 61075 Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111 ||| | | || ||||| || ||| ||| ||||| ||||| | | ||||| Sbjct 61074 GGACATTGAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTAT 61015 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 | || || || | ||| ||||| ||||| || | | ||||||||| |||| ||| | Sbjct 61014 CGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTG-G 60956 Query 107172 GTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 107228 | || || |||||||| ||||| || || || | ||||| ||| | | |||| | Sbjct 60955 GCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGA--AGAACTTGCTCG 60898 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATGGCC 107287 |||| || ||| ||||| | ||| ||||| ||| || || ||||| | ||| Sbjct 60897 ACATGAGGTTGTACGTCTCAATAACACGATCAA-CTCTGTCGCCCCAAATGCCAACAGCC 60839 Query 107288 ACACGCATAAACATGTATTGGGG 107310 |||||||||| ||||| ||||| Sbjct 60838 ACACGCATAATCATGTGCTGGGG 60816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976810254840