Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq21 201 1e-46
>seq21
Length=78807
Score = 201 bits (222), Expect = 1e-46
Identities = 902/1403 (64%), Gaps = 51/1403 (4%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|||||||| | ||||| || || ||||| || || || |||| || || | ||| |
Sbjct 62194 TAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTG 62135
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| || || | || || ||| || | ||| | | |||||| | |||
Sbjct 62134 GCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCC 62075
Query 106055 TTGAGA-ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112
||||| ||| ||||||| || | ||| || | || |||| |||| || || || |
Sbjct 62074 TTGAGCGACA-CCCAGTCCCAGAGGTCGCTGGGAGTGACATTCC-ACATGTCGAACTGCA 62017
Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172
| | || ||||| ||| || ||||| | || |||| ||| | | | || |
Sbjct 62016 GGATGCCCTGGGAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAA 61957
Query 106173 ATTCACAGCTCG-CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
|| || | | || ||| | ||||| || |||||||||||||| | | || | |
Sbjct 61956 TATC-CATCGAGGCCGTCAGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAGC 61898
Query 106232 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 106286
| || || | || ||||| |||| |||| || ||| |||| || |
Sbjct 61897 TTGCGAGCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAG-----CATCAGCCA 61843
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345
|||| || ||||| | ||||||||| | ||| ||||| || || | | | || ||||
Sbjct 61842 GACCCTGGACACCAACACCAATAGGACGGTGGCGCATGTTG--CTGTTGTG-AGCCTCAG 61786
Query 106346 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403
||||| || || |||||||| ||||| || || ||||| ||| ||||
Sbjct 61785 GCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGA 61726
Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463
|| || || || | | || | | | | | | |||| || || || |
Sbjct 61725 CCTCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAGAG 61666
Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523
| | || |||| ||||| || || |||||| | |||||| | ||| || |
Sbjct 61665 CCAGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGG 61606
Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583
| |||| |||||| || || || |||| ||||| ||||| ||||| ||| ||
Sbjct 61605 TGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGT 61546
Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643
|||||||| ||||| | || | |||||||| ||||| | || ||||| || | ||
Sbjct 61545 GGTCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACC 61486
Query 106644 ACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702
| | | || | | || | | | | || | | || |||||| ||||||| || |||
Sbjct 61485 ATAGCTTCTGGGCCTTGATCGACG-CGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTAC 61427
Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762
|| || ||||||||||| || ||| | || || || || || || || |
Sbjct 61426 AGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATC 61367
Query 106763 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-- 106820
|||| ||| | || |||||| ||||||||||| ||||| || |||||||| |
Sbjct 61366 AGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCC 61307
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| |||| || || | || |||| || | || ||||| || | |||||||
Sbjct 61306 AGGAAA--AGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGA 61249
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTT-T 106933
| || | | |||||||||||| ||||| || || | || | || | ||| |
Sbjct 61248 AGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGT 61189
Query 106934 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993
| ||||| |||| || ||||| || ||| ||| || || || ||||| |||||
Sbjct 61188 TGCCGCCC----TGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATG 61133
Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCAT 107051
||||| | || ||| || || || || |||||| | |||| | | ||
Sbjct 61132 ATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAG--CCAGTGGCACGGATGCGAT 61075
Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111
||| | | || ||||| || ||| ||| ||||| ||||| | | |||||
Sbjct 61074 GGACATTGAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTAT 61015
Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171
| || || || | ||| ||||| ||||| || | | ||||||||| |||| ||| |
Sbjct 61014 CGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTG-G 60956
Query 107172 GTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 107228
| || || |||||||| ||||| || || || | ||||| ||| | | |||| |
Sbjct 60955 GCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGA--AGAACTTGCTCG 60898
Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGATGGCC 107287
|||| || ||| ||||| | ||| ||||| ||| || || ||||| | |||
Sbjct 60897 ACATGAGGTTGTACGTCTCAATAACACGATCAA-CTCTGTCGCCCCAAATGCCAACAGCC 60839
Query 107288 ACACGCATAAACATGTATTGGGG 107310
|||||||||| ||||| |||||
Sbjct 60838 ACACGCATAATCATGTGCTGGGG 60816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589976810254840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |