Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq180 86.0 5e-12
>seq180
Length=32333
Score = 86.0 bits (94), Expect = 5e-12
Identities = 196/294 (67%), Gaps = 6/294 (2%)
Strand=Plus/Plus
Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044
|||||||||||| | ||||| || ||||| || || ||||| ||| ||
Sbjct 9222 CACGTAAAACTGCGCAAACATG---TGACACGGTGGCAGCGCCATCTTCTTCAAATCCGC 9278
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
|| ||||| || | || ||||||||| | || | || | ||| | | || |||
Sbjct 9279 CGGATTCCACGCACTCATGATGATGCGTCGATCGTACGGAGTATTCTTCAGCTTGTGCAC 9338
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164
| | ||||||||| || ||| |||| |||||| | | | || |||||
Sbjct 9339 CACCTCCGCCAGCTGATCGACGCCCTGACCCGTGTAGTCCGTCTGCGCATCGACATACTC 9398
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
||| || ||||||| |||||||||||||||||| || |||| || ||||| ||| |||
Sbjct 9399 TGCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAATCGCCCTCAGCCCGGTG 9458
Query 30225 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30278
| | |||| |||| | | | | || || ||| |||||||||||||
Sbjct 9459 GCCCAGGCCCACGCTGTCGAGGTACGCGCGCGACCCATTGCCGTCCCAGATCTT 9512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408614905805393
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |