Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq21 196 6e-45 seq103 93.3 5e-14 >seq21 Length=78807 Score = 196 bits (216), Expect = 6e-45 Identities = 903/1405 (64%), Gaps = 51/1405 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGA-AGACATTGATTCTGT 75270 || ||| ||||| | ||||| || || | ||||| || || ||| ||||| ||| Sbjct 60816 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATTTGGGGCGACAGAG-TTGATCGTGT 60874 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 | ||||| ||| || ||||| |||| | | ||| ||||| | || || || Sbjct 60875 TATTGAGACGTACAACCTCATGTCGAGCAAGTTCT--TCACCCACGCCTCGCCCACTCTG 60932 Query 75329 TTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387 ||||| |||||||| || || || ||| |||| ||||||||| | | || ||||| Sbjct 60933 TTCAACGCTGGTACGCCCCAGGCC-CAGCTGTCATCTTGCTTCCTGGTTGACATGAAGGA 60991 Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447 ||||| ||| | || || || | ||||| | | ||||| ||||| ||| ||| Sbjct 60992 AGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGGC 61051 Query 75448 TGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGG 75505 || ||||| || | | ||||| | | |||| | |||||| || || Sbjct 61052 CGGTGGTATCGGACTCAATGTCCATCGCATCCGTGCCACTGG--CTCGTACATTGCCGGC 61109 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||||| ||||| ||||| || || || ||| ||| || ||| Sbjct 61110 ACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGC 61169 Query 75566 TATGTAAATCAAGCGGGGCGTCG-CAAGGG-----GT-CCATCGCGGTCTACTTGGAACC 75618 || || |||| ||||| | |||| | || || | || | ||| |||| || Sbjct 61170 TACGTCGATCA----GGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCC 61225 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| || ||| | | || |||||||| | || ||||| || | || |||| Sbjct 61226 GTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 61285 Query 75679 TCGGTGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || | || || |||| | | |||||||| || ||||| ||||||||||| ||| Sbjct 61286 CCGCGCCCGTGACCT--TTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGTGTT 61343 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796 ||| || | ||| |||| | || || || || || || || | ||| Sbjct 61344 GAGAAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGC 61403 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 || ||||||||||| || || ||| || ||| || ||||||| | | | ||| Sbjct 61404 TACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAGGAGGGCCGTGGCCGCGCG 61463 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 | | | || | | || | | ||| | || ||||| | | ||||| ||||| || | Sbjct 61464 TC-GATCAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACGGGCAA 61522 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | |||||| |||||||| |||||| ||||| ||||| ||||| |||| || Sbjct 61523 CCCGTTTATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTGGGCAC 61582 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| || || ||||| || ||| | |||||| | |||||| || Sbjct 61583 CATCCGCAGCTCCAACCTGTGCACCGAGATTATCGAGTACTGTGCGCCCGATGAGGTTGC 61642 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095 || ||||| |||| || | || || || || |||| | | | | | | Sbjct 61643 CGTATGCAACCTGGCTTCGCTGGCTCTGCCGGCGTTTGTCGACTACAACAAGAACGAGTA 61702 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 || | | || || || || |||| ||| ||||| || || ||||| |||| Sbjct 61703 CGACTTCCAGAAGCTACACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCAT 61762 Query 76156 TGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 |||| || || ||||| |||| || | | | || || ||||| ||| | || Sbjct 61763 TGACGTCAACCACTACCCCGTGCCTGAGGCT-CACAACAG--CAACATGCGCCACCGTCC 61819 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA----- 76267 ||||||| | ||||| || ||||| || |||| ||| || |||| |||| Sbjct 61820 TATTGGTGTTGGTGTCCAGGGTCTGGCTGATG-----CTTTCCTGGCGCTGCGCATGCCT 61874 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 ||||| || | || || || | || | | |||||||||||||| || ||||| Sbjct 61875 TTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCAGATCTTTGAAACCATCTACCACGCT 61934 Query 76328 TCCCTGGAGG-CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 | ||| || | | || || | || | | | ||| |||| || | ||||| Sbjct 61935 GCTCTGACGGCCTCGATG-GATATTGCCAAGGAGGAGGGTACCTACTCTACGTACGAGGG 61993 Query 76387 TTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCA 76445 || |||| ||||| || | || ||||| || |||| |||| || | || ||| | Sbjct 61994 CTCGCCCGTTTCCCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACTCCCAGCGACC 62052 Query 76446 ACTACGACTGGGATGT-TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 || ||||||| ||| |||||||| | |||||| || | ||| | || ||| || Sbjct 62053 TCTGGGACTGGG-TGTCGCTCAAGGAGCAGATCAAGCAGCACGGTGTGCGCAACTCGCTG 62111 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 || | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 62112 CTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTC 62171 Query 76565 GAACCATACACAACAAACATCTACC 76589 || || ||||| | |||||||||| Sbjct 62172 GAGCCGTACACTTCCAACATCTACC 62196 >seq103 Length=50471 Score = 93.3 bits (102), Expect = 5e-14 Identities = 302/458 (66%), Gaps = 12/458 (3%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | || |||||| | ||||| | | | | | || ||||||||||| Sbjct 34471 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAAAGTTTGTGCGGCTGGGCGCCAAGATCCCG 34530 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 || || ||| |||| ||||| ||| || ||||||||||| || | ||| |||| Sbjct 34531 CGCGGTGCCATTCTGTCGGGTCCGCCGGGAACGGGAAAGACGCTGTTGGCCAAGGCCACG 34590 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGATGT 175408 ||||| || || || || ||| | ||| | || || | | | ||||| ||||||| Sbjct 34591 GCGGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGGTCGGAGTTTGTCGAGATGT 34648 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| || |||||| | | || || || | |||| | || || | ||| | Sbjct 34649 TTGTCGGCGTGGGTCCGTCGCGAGTGCGTGACTTGTTTGCCACGGCGCGTAAGAATGCGC 34708 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG-CTGG--TG 175525 | || |||||||| || || |||||||||||| | ||| | ||||| || || | Sbjct 34709 CGTGCATTGTCTTTATCGACGAGATTGATGCGATTGGCCGGTCACGCACCGACTCGAACC 34768 Query 175526 GTAT-GCCAGC--AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGG 175582 | || | | || || |||||| | || || | || || | || || || |||| Sbjct 34769 GCATGGGCGGCGGCAACGACGAGCGCGAGTCGACGCTGAACCAGATCCTGACGGAAATGG 34828 Query 175583 ATGGCTTTGACAATG-AGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATC 175641 | ||||| ||| | || | ||||| || | || | ||| || |||| |||||| Sbjct 34829 ACGGCTTCAACACGGCCGAGCAG-ATTGTCGTGTTGGCCGGCACAAACCGCGCGGATATT 34887 Query 175642 CTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || || | || || | || ||||| || |||||||| Sbjct 34888 CTGGACAAGGCGCTGATGCGGCCGGGACGCTTTGATCG 34925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565565698080