Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq512 131 5e-25
seq101 125 2e-23
>seq512
Length=116584
Score = 131 bits (144), Expect = 5e-25
Identities = 395/602 (66%), Gaps = 30/602 (5%)
Strand=Plus/Minus
Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459
||||| || ||||| || | | ||| | || |||| | |||||||||| | ||| |
Sbjct 106476 AGGCGTCATCAGACCGCAAATCTCACAAATGTGAACGCGGAAAGCATCAGAGACCTCAAA 106417
Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519
|| || |||| ||| || |||||||| | ||||||||||||||| ||||||||
Sbjct 106416 GAGACGCTCCTTCAGGAAAGCAGCGGCACCGTGGGCAATCATACAATCACGTTCCATTTC 106357
Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579
|||||||| ||||||||||| || || | ||||||| | ||||| || || | | |
Sbjct 106356 TCCGAAACGCAGACCACCATCACGCGCACGACCCTCGACGGGCTGGCGCGTCATAATCTG 106297
Query 251580 CATAGGACC----GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCT 251635
| ||||| | ||||| || ||| || | |||||||| |||||||
Sbjct 106296 TACGGGACCACGAGCACGAGCG----TGAATCTTGTCGTCCACCATATGGCGAAGACGCT 106241
Query 251636 GGTAGAATGCGGGACCGATGAAGA----TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCG 251691
||||| | | |||||||| ||||| || ||||| |||| ||||| || ||
Sbjct 106240 GGTAGTACGTGGGACCGAAGAAGACCTGGGCGCGAAG---CTTGC-GACCAGTGTGACCG 106185
Query 251692 TTATACATAACTTCGTTTCCATTAGATTCATAACCAAGTT---TCTGTAGCTCTGAAGCA 251748
| || | || ||| ||| ||| | ||||| | | | |||| | ||| |
Sbjct 106184 TGGTAAAGCACCTCGAAACCACGAGACTGGTAACCGTGCTCACGCAGTAGGTTGGAAACC 106125
Query 251749 ATATCACCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATC 251808
| | | | ||| | | | ||| ||| | || || | | |||| | | |
Sbjct 106124 GAGT---CGACCGTGACATCGGTGAAAGGCGTGGCATCACCCTCCATACCCTTGAGCGTG 106068
Query 251809 AACACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCA 251868
||||||| | | ||| ||| ||||| || |||||||| ||||| ||
Sbjct 106067 GCGACTTTGCTGAGCAAGCACTCAATCAAATGGGCAATGGTCATACGCGACGGAATGGCG 106008
Query 251869 TGGGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCC 251928
||||| |||||||| ||||| || | | || ||| | ||||||||||||| |||
Sbjct 106007 TGGGGGTTGATGATAATGTCAGGAGTGATACCTTCACGGGAGAAGGGCATATCC---TCC 105951
Query 251929 T--CAATA-ATGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCA 251985
| | ||| || |||||||| ||||| || ||||||||||| ||||| |||||
Sbjct 105950 TGACGATACGTGACACCAATAGTACCCTTCTGACCGTGACGAGACGCAAACTTGTCACCG 105891
Query 251986 AT 251987
||
Sbjct 105890 AT 105889
Score = 95.1 bits (104), Expect = 4e-14
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
|||||||| |||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct 106391 GCACCGTGGGCAATCATACAATCACGTTCCATTTCTCCGAAACGCAGACCACCATCACGC 106332
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAGCACGATAATT 233391
| | ||||| ||| | || || || | || | || | ||||| |||||||| |
Sbjct 106331 GCACGACCCTCGACGGGCTGGCGCGTCATAATCTGTAC-GGGACCACGAGCACGAGCGTG 106273
Query 233392 AATTTTATCTTTAACCATATG 233412
||| || || | ||||||||
Sbjct 106272 AATCTTGTCGTCCACCATATG 106252
>seq101
Length=191744
Score = 125 bits (138), Expect = 2e-23
Identities = 196/276 (71%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651
|||||||||||| || ||||| | ||| || || || || ||||| ||||| ||||
Sbjct 166169 ACGACGCTGAATGTAGCCAGTCTCGGCTGTCTTGACGGCAGTGTCAATCAGACCTTCACG 166228
Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCT 302710
|||| |||| || |||||||| | ||| | || || || || | | | | ||| |||
Sbjct 166229 ACCAGCCATGGCGTGGAAGAAGAACTC-GCTGGGAGTCAGGCCACGGAGATACGAGTTCT 166287
Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770
| ||||| ||||| |||||||| || | ||| |||||| ||||| ||||| || | ||
Sbjct 166288 CGACGAAGCCACGGGCCTCGGGGGAGTAATCGTCCTTGGTGAAGTGGGGCAGAGTGCGGT 166347
Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGA--AAT 302828
|| | ||| | || |||||||| || || || ||||||| || | || || |
Sbjct 166348 ACTTGAATCCGAAGGGAATACGCTTACCCTCCACAATCTGCTGACC--GACAAGAGCTGT 166405
Query 302829 CATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
||| |||||||| || | | | |||||||| ||
Sbjct 166406 CATTTGCGAAATGTTGATAGTAGAACCCTTGGAACC 166441
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
||||| || | | ||| || ||||| |||| ||||| |||||| | |||||||||
Sbjct 165366 AGAATCTCCTTGAGACGAGGCACACCCAGGGTGACGTT---CTTGGAAGAAACACCAGCG 165422
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| |||||||| ||||| || | ||||||| ||||||||||| || || |||| |
Sbjct 165423 AAATGGAAAGTGTTCAGCGTCATCTGAGTAGCGGGCTCACCAATCGACTGCGCAGCAAGC 165482
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||||||||| || || ||
Sbjct 165483 ACACCAACCATCTCGCCAGG 165502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471807398004317
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |