Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq21 199 4e-46 seq13 118 1e-21 seq88 87.8 2e-12 >seq21 Length=78807 Score = 199 bits (220), Expect = 4e-46 Identities = 1065/1678 (63%), Gaps = 64/1678 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415 ||||||||||| |||||||| || | | |||||| || || | | |||||| | Sbjct 62377 ATCTCCCACACAGTCTTGTACAG--CGCCTTGATGTCGTCAGGGATGCTAGGAATATTCT 62320 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | | || || | ||||||||||| || |||||| ||| ||||| || | Sbjct 62319 GGACCGAACCATTCTCAGCAATGATGCGGTTCTTCATGTTATCCGACCACAGACCCAGGT 62260 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || ||| || | || | ||| | ||||| || || || |||| || |||| Sbjct 62259 CGACCAAATCACGCAACAACCACGGGTTAACAACCTGGAACTCGCCAGCCAGCACACGAC 62200 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| |||||| ||| | ||||| || | |||||||| ||||||||||| | || Sbjct 62199 GCTGGTAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACG 62140 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 || | || ||||||||| ||| | || || || || || | |||||| ||||||| Sbjct 62139 TGCTGGCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCT 62080 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | |||||||||||| ||||||||| | ||||| || | |||||||| ||| ||| Sbjct 62079 GCTCCTTGAGCGACACCCAGTCCCAGAGGTCGCTGGGAGTGACATTCCACATGTCGAACT 62020 Query 138716 GTAACATTCCC----AAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCT 138771 | | || ||| ||| |||| ||| ||||||| | ||| ||| ||| Sbjct 62019 GCAGGATGCCCTGGGAAA----CGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCC 61964 Query 138772 TGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGA 138831 | || | || | ||| || ||| | | ||| || ||||| |||||| Sbjct 61963 TTGGCAATATCCATCGAGGCCGTCAGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTG 61904 Query 138832 TTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCC 138891 |||||| || |||||||| ||| | |||||||| ||| | ||| || || ||| Sbjct 61903 TTGAGCTTGCGAGCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCC 61844 Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC 138950 || || || || || || || | ||| || ||||||| || ||| ||| | || || Sbjct 61843 AGACCCTGGACACCAACACCAATAGGACGGTGGCGCA----TGTTGCTGTTGTGAGCCTC 61788 Query 138951 ---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007 | || || | ||| || || ||||| ||| | || ||||| || ||||| || Sbjct 61787 AGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGT 61728 Query 139008 CGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGAC-GACGTCGACAA 139066 | | || | || ||||| | | ||||| |||||| ||| || || Sbjct 61727 GACCTCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAG 61668 Query 139067 ATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATT 139126 | | | | ||| || | |||||| || || || || ||||| | | ||| | Sbjct 61667 A------GCC----AGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACT 61618 Query 139127 CGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTT 139186 ||| ||| |||| |||| || | ||| || || | || | || ||||| | Sbjct 61617 CGATAATCTCGGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCT 61558 Query 139187 TTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTA 139246 | |||||||| || ||||| |||||| |||| |||| || || || | ||| | Sbjct 61557 TGCGGTTACAGTGGTCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCA 61498 Query 139247 TAATGAATTTGAACA-AGTCCCTAG--CTTGTATTTGACGCAC-GTAAAGTTCGTCGCGC 139302 |||| | | || || || | |||| | ||||| | | | | | || || Sbjct 61497 GAATGGCGT--ACCATAGCTTCTGGGCCTTG--ATCGACGCGCGGCCACGGCCCTCCTGC 61442 Query 139303 TCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACAC 139362 |||||| ||||||| || | || || || |||||| ||||| || | | ||| Sbjct 61441 TCGTACCTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCAC 61382 Query 139363 TTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCC 139422 | || || ||||| || | ||| | |||| || || ||| ||||||| || || Sbjct 61381 TCGTTGGGGCACATCAGAGTCCAGTCCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCA 61322 Query 139423 GGAATCCACAAAGCGAACAGCAAA---TCGCGCGCCTTCTTATCTTCCGAACCCATGTTA 139479 || |||||| |||| ||| ||| || || || || ||| || ||| Sbjct 61321 GGGATCCAC--AGCG-CCAGGAAAAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTC 61265 Query 139480 CGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 || || |||||| ||||| || || |||||||| || ||||| || ||||| | Sbjct 61264 TTGCGCAGGTCAAGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAG 61205 Query 139540 GCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||||| || |||||||||| || ||| || ||||| || ||| Sbjct 61204 GCACCAGGGCGCTTGTTGCCGCCCTGATCGACGTAGCGGGCAGTGTTGTTGAACACACGC 61145 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652 | ||| || | |||| | | || |||||||| || | | | | | | || Sbjct 61144 AGCATGGGAATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAGCCAGT---- 61089 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| | ||| ||||||| ||||| || ||| | | ||||| || | | | || Sbjct 61088 GGCACGGATGCGATGGACATTGAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACA 61029 Query 139713 A-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771 | || | | || ||||| || || || ||| |||| ||| ||||| |||| Sbjct 61028 AGTCTTG-AGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGC 60970 Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831 | || || || || | | ||| || || |||||||| || ||||| |||| Sbjct 60969 AAGATGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGA 60910 Query 139832 ACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAA-TATCCCTTCCGTGG 139890 | | | ||||||| | | |||||| || || | | ||| | | | || Sbjct 60909 AGAACTTGCTCGACATGAGGTTGTACGTCTCAATAACACGATCAACTCTGTC-GCCCCAA 60851 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950 || || |||| || ||||| | ||| || ||| || ||| | | | ||| || | Sbjct 60850 ATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCTAGC 60791 Query 139951 tttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || ||| || | || |||||| |||||| ||||||||||| |||||||| || Sbjct 60790 TTCAGCAGGTACGAACG--CTCTAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 60735 >seq13 Length=236849 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || || | Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || |||||||||||| | | |||| || || ||| Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| |||| |||| |||| || ||| Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGGC 135354 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || || | Sbjct 135809 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135750 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 135749 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 135690 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || || || || ||||| || ||| | | | || || || ||| Sbjct 135689 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAAC 135630 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| ||||| |||| Sbjct 135629 ATCCAGAAGGAGTCTACTCTGCACCTGGTGCTGCG 135595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || || || || || || || ||| | ||||||| | || | || || Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACGTCAAGTCG 136238 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || || || || |||||||||| || || Sbjct 136237 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAAG 136178 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| | | |||| || || ||||| || ||||| || || || ||| Sbjct 136177 CAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 136118 Query 24908 TTGGTGTTGCG 24918 | ||| |||| Sbjct 136117 CTTGTGCTGCG 136107 >seq88 Length=56780 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || || || ||||| || ||||| ||||| || || || | Sbjct 28099 GATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 28158 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || || || || || || || ||||| Sbjct 28159 GGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCA 28218 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| || || || |||||||||||| | | |||| || || || Sbjct 28219 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAA 28278 Query 24883 CATTCAAAAGG 24893 ||| || |||| Sbjct 28279 CATCCAGAAGG 28289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894557567480