Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq516 127 2e-24
seq13 89.7 4e-13
>seq516
Length=113924
Score = 127 bits (140), Expect = 2e-24
Identities = 218/314 (69%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378
||||||| ||||| | || | | |||| ||||||||| ||||| || | |
Sbjct 45391 CAGTCTCGGGGTTCTTGCACTTCTTGCACAGAACAAACTTGACAATGAAGCCGTAGACGT 45332
Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||||||| | ||| || ||||| |||||||||| ||| | || || | | |
Sbjct 45331 GGTCCTGCAGCTTCTTGGTATCGTGCGAGCCGTTGATGATCCAGCGGTCATCCGCGGGGT 45272
Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498
| | | || || || |||||||| | || |||||||| || ||| | | ||||
Sbjct 45271 CAATGTTGGTCTGGGCACCCAGCTCAAAGCCAAAGTACTTGATCAGGTGAGCACCAGGAC 45212
Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| | || | || ||||| | | || |||||| |||||||||||||| ||||| ||||
Sbjct 45211 GAGCCAGTGACTGGGCGACGGCCGACAGGTTGACAATGACAGTCTTGATACCGTTACCCT 45152
Query 34559 TTCCTTCGACCTTGGCGCAGATG-CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617
| ||||||| ||||| | || | || ||||| ||||| ||||||||| ||| | | |
Sbjct 45151 TGCCTTCGATCTTGG-TCTGAAGACGGGGCATCTTGTACCGGTAGAACTGGTCGGAGATA 45093
Query 34618 TTGCGGTTAACGTT 34631
| | ||||||||||
Sbjct 45092 TCGGGGTTAACGTT 45079
>seq13
Length=236849
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| ||| | |||||||| ||||| || | || |||| |
Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| ||||| || ||| | ||| ||| ||
Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | ||| ||||| ||||||||||||| | | ||| || | || ||||||
Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || || ||||| |||| | | ||||| || ||
Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGG 135355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412838877954713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |