Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq516 127 2e-24 seq13 89.7 4e-13 >seq516 Length=113924 Score = 127 bits (140), Expect = 2e-24 Identities = 218/314 (69%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 ||||||| ||||| | || | | |||| ||||||||| ||||| || | | Sbjct 45391 CAGTCTCGGGGTTCTTGCACTTCTTGCACAGAACAAACTTGACAATGAAGCCGTAGACGT 45332 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||||||| | ||| || ||||| |||||||||| ||| | || || | | | Sbjct 45331 GGTCCTGCAGCTTCTTGGTATCGTGCGAGCCGTTGATGATCCAGCGGTCATCCGCGGGGT 45272 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | | | || || || |||||||| | || |||||||| || ||| | | |||| Sbjct 45271 CAATGTTGGTCTGGGCACCCAGCTCAAAGCCAAAGTACTTGATCAGGTGAGCACCAGGAC 45212 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | | || | || ||||| | | || |||||| |||||||||||||| ||||| |||| Sbjct 45211 GAGCCAGTGACTGGGCGACGGCCGACAGGTTGACAATGACAGTCTTGATACCGTTACCCT 45152 Query 34559 TTCCTTCGACCTTGGCGCAGATG-CGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 | ||||||| ||||| | || | || ||||| ||||| ||||||||| ||| | | | Sbjct 45151 TGCCTTCGATCTTGG-TCTGAAGACGGGGCATCTTGTACCGGTAGAACTGGTCGGAGATA 45093 Query 34618 TTGCGGTTAACGTT 34631 | | |||||||||| Sbjct 45092 TCGGGGTTAACGTT 45079 >seq13 Length=236849 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| ||| | |||||||| ||||| || | || |||| | Sbjct 135581 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCG 135522 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||| || ||| | ||| ||| || Sbjct 135521 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 135462 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| ||||| ||||||||||||| | | ||| || | || |||||| Sbjct 135461 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAAC 135402 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || || || || ||||| |||| | | ||||| || || Sbjct 135401 ATCCAGAAGGAGTCGACCCTGCACCTGGTTCTGCGTCTGCGTGGCGG 135355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838877954713