Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq13 120 2e-22
seq131 111 1e-19
seq88 100 2e-16
>seq13
Length=236849
Score = 120 bits (132), Expect = 2e-22
Identities = 158/217 (73%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 135369 CAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATC 135428
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| || |||||||| | || | |||||||||||
Sbjct 135429 CTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 135488
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || || ||| || || | || |
Sbjct 135489 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGA 135544
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || ||||| ||||||||||||||
Sbjct 135545 TGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 114 bits (126), Expect = 8e-21
Identities = 157/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | || ||||||||| ||||| |||||||| || |||| ||||
Sbjct 135597 CAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATC 135656
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||| ||||| || |||||||| | || | |||||||||||
Sbjct 135657 TTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 135716
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || || ||| || || | || |
Sbjct 135717 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGA 135772
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || ||||| ||||||||||||||
Sbjct 135773 TGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 105 bits (116), Expect = 4e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | || ||||||||| ||||| |||||||| || |||| ||||
Sbjct 135825 CAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATC 135884
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||| |||| || |||||||| | || | |||||||||||
Sbjct 135885 TTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 135944
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | |||||| || | ||| |||||
Sbjct 135945 CTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACTTCGAGGGTGATGGT 136004
Query 34945 CTTTCCCGTGAGGGTCTTTAC 34965
||| || ||||||||||| ||
Sbjct 136005 CTTGCCGGTGAGGGTCTTGAC 136025
Score = 89.7 bits (98), Expect = 3e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | || ||||||||| ||||| ||||| || || |||| ||||
Sbjct 136109 CAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATC 136168
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || || |||||||| || |||||||| | || | |||||||||||
Sbjct 136169 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTC 136228
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | || || |||| ||| |||||
Sbjct 136229 CTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTCCACCTCAAGGGTGATGGT 136288
Query 34945 CTTTCCCGT 34953
||| |||||
Sbjct 136289 CTTGCCCGT 136297
>seq131
Length=44026
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||||||||| ||||| || || |||| |||| || || ||||| || || ||||
Sbjct 31459 CCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 31400
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 31399 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 31340
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| |||| || || |||||| || | ||| |||||||| ||||| |||||||| || |
Sbjct 31339 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 31280
Query 34968 A 34968
|
Sbjct 31279 A 31279
>seq88
Length=56780
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || || |||| |||| ||||| ||||| || |||||||
Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || ||||| || | || | |||||||| || | || || ||||| ||
Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGAC--AT- 28173
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || ||| || || | ||| || ||||| ||||| ||||||||
Sbjct 28172 -TGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTG 28114
Query 34964 ACAAAGATCTGCAT 34977
|| || ||||||||
Sbjct 28113 ACGAAAATCTGCAT 28100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690652564879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |