Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq512 96.9 1e-14 >seq512 Length=116584 Score = 96.9 bits (106), Expect = 1e-14 Identities = 122/163 (75%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || |||||||| || |||||||| | |||||||||| |||||| Sbjct 106047 CTCAATCAAATGGGCAATGGTCATACGCGACGGAATGGCGTGGGGGTTGATGATAATGTC 105988 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGG-TACAATCAAACCAA 309802 ||| | || || | | || ||| |||||||| || | | | ||| | | ||||| Sbjct 105987 AGGAGTGATACCT-TCACGGGA--GAAGGGCATATCCTCCTGACGATACG-TGACACCAA 105932 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||| ||| |||| | || |||||||||||||| || Sbjct 105931 TAGTACCCTTCTGACCGTGACGAGACGCAAACTTGTCACCGAT 105889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951960869767448