Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq13 118 2e-21
>seq13
Length=236849
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | |||||||||||| || ||||| || || || || || || | | |||
Sbjct 135595 CGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCA 135654
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||| || || || | || || || ||||| || || |||||
Sbjct 135655 TCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTG 135714
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| | || ||||| || || || || | || || |||| ||| ||
Sbjct 135715 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATG 135774
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||| ||||||||
Sbjct 135775 GTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 113 bits (124), Expect = 9e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || ||||||||| | |||||| || || || ||||| || || || || ||
Sbjct 135355 CCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 135414
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || || || ||||||||||| || | || || || || ||
Sbjct 135415 AGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 135474
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| | || ||||| || || || || | || ||
Sbjct 135475 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 135534
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| ||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 135535 TCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 95.1 bits (104), Expect = 2e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | |||||| || | ||| |||||||| || ||||| || || || || |
Sbjct 136093 TACCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGG 136152
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || || || || || || ||||||||||| || | || || || ||||
Sbjct 136153 ACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAG 136212
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| || || ||||| | || || || || || || || || ||| |
Sbjct 136213 GGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTCCA 136272
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788
| || | || || |||||||| ||||
Sbjct 136273 CCTCAAGGGTGATGGTCTTGCCCGTCA 136299
Score = 91.5 bits (100), Expect = 3e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | |||||||||||| || ||||| || || || || || || | | |||
Sbjct 135823 CGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCA 135882
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||| || || | | || || || ||||| || || |||||
Sbjct 135883 TCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGAATGCCCTCCTTG 135942
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| | || || || || || ||||| | || ||||| | || ||
Sbjct 135943 TCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACTTCGAGGGTGATG 136002
Query 82776 GTCTTGCCTGTCAACGTCTTTAC 82798
|||||||| || | ||||| ||
Sbjct 136003 GTCTTGCCGGTGAGGGTCTTGAC 136025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981820394403399
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |