Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 8e-15 >seq13 Length=236849 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || |||||| |||| ||||| || ||| Sbjct 135806 CAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCGGAC 135747 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 135746 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 135687 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| || |||||| | |||||||| | || | | || |||||| || Sbjct 135686 CGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATC 135627 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||||||||| ||||| || Sbjct 135626 CAGAAGGAGTCTACTCTGCACCTGGT 135601 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| | || |||||| ||| ||||| |||| || ||| Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACGTCAAGTCG 136238 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || || |||||| || | || ||||| || || ||| Sbjct 136237 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAAG 136178 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| | || || |||| |||||| ||||||| ||||||||||| ||| Sbjct 136177 CAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 136118 Query 206374 CTTGT 206378 ||||| Sbjct 136117 CTTGT 136113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812608135261