Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq90 113 4e-20
>seq90
Length=200924
Score = 113 bits (124), Expect = 4e-20
Identities = 328/493 (67%), Gaps = 19/493 (4%)
Strand=Plus/Plus
Query 46776 AAGGCCCAGTGGGCCATGAAGTGGAT---CGAGAGCGAGACCGCCACGCTGGCCGAGCGC 46832
|||||| | |||||| | |||||||| ||| ||||| | || | ||| ||||
Sbjct 194219 AAGGCCGACTGGGCCCTCAAGTGGATTTCCGATCGCGAGTCGACCT---TTGCCCAGCGT 194275
Query 46833 ATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTT 46892
||||||| || || ||||| ||| | || || |||||| |||||| |||||||
Sbjct 194276 CTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTC 194335
Query 46893 TACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGC 46952
| | | || | ||||| || ||||| || |||||| |||| ||||||
Sbjct 194336 TGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGC 194395
Query 46953 GACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAA 47011
|||||||| || ||||| |||||||| || || || || ||| | |||| |
Sbjct 194396 GACGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCT----CGCACCTGAACAACCG 194451
Query 47012 ATTAAACTCGGA-CACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGT 47070
| | | | | || | || || | | || || || ||| |||||||| |
Sbjct 194452 CCCCAGCAAGAAGCTCGTTGAGGAA-ATCATCACCGACGCCGTCGTCATTGAAAAGGAAT 194510
Query 47071 TTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAA 47129
| | || | ||| |||||| |||| |||| ||||||||||| | ||| ||| |
Sbjct 194511 TCCTGACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGC-CGATCTCATGAAGCAG 194569
Query 47130 TATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAAT 47189
|| ||||||||||| || || |||||| |||| ||||| ||| ||| | | ||
Sbjct 194570 TACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCCCTCGG-CAA-CGACAAGGTCTACC 194627
Query 47190 GCTC--GTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTT 47247
|||| || || ||||| || ||| | ||||| ||||| | ||||| ||||| || |
Sbjct 194628 GCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCT 194687
Query 47248 TCGAGAAACGAGT 47260
| ||||| || ||
Sbjct 194688 TTGAGAAGCGTGT 194700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476607976916760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |