Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq13 125 7e-24 seq88 102 8e-17 seq131 100 3e-16 seq21 98.7 1e-15 >seq13 Length=236849 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| ||||| || || || ||||| || ||||||||||| Sbjct 135583 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135642 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || ||||| ||||| || ||||||| ||||||||| || || || Sbjct 135643 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGA 135702 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || ||||| Sbjct 135703 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 135762 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || ||||| | ||| || || || || ||||| Sbjct 135763 TCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809 Score = 116 bits (128), Expect = 4e-21 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || || || ||||| || |||||||||||| || ||||| Sbjct 135364 AGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG--GACAGTGTGC 135421 Query 134556 G--AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTT 134613 | || || ||||| || || ||||| |||| ||||||||| || || || ||||| | Sbjct 135422 GGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCT 135481 Query 134614 CTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAG 134673 | || || || || || ||||| ||| | ||||| || || ||||| || |||| Sbjct 135482 CCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAG 135541 Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || ||||| | ||| || || || || ||||| Sbjct 135542 TGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| ||||| || || || ||||| || ||||||||||| Sbjct 135811 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135870 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || ||||| ||||| || ||||||||||||||||| || || || Sbjct 135871 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGA 135930 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | || || ||||| || || Sbjct 135931 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 135990 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 ||||| || ||||| || ||||| | || || |||| Sbjct 135991 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 136027 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| ||||| || || || ||||| || |||||||||||| Sbjct 136095 CCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG--G 136152 Query 134547 ACGGTGTGAG--AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||||| | || || ||||| || || ||||| |||| |||||||| || || | Sbjct 136153 ACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAG 136212 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || || || ||||| ||| | |||||||| ||||||| Sbjct 136213 GGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTCCA 136272 Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689 | || || || ||||| || || || Sbjct 136273 CCTCAAGGGTGATGGTCTTGCCCGT 136297 >seq88 Length=56780 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | ||| | || || ||||| ||||| || || | Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||||| || || ||||| || || || || || || ||||| || Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| ||||| || ||||| || | || || |||| Sbjct 28169 CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 28110 Query 134704 AAATTTGCATTTTG 134717 |||| ||||| ||| Sbjct 28109 AAATCTGCATCTTG 28096 >seq131 Length=44026 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| ||||||||||||||| | ||| | || || ||||| ||||| ||||| | Sbjct 31459 CCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 31400 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||||||| || || || ||||| || || || || || || ||||| || Sbjct 31399 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 31340 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || || || |||||||| ||||| || | || || |||| Sbjct 31339 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 31280 Query 134704 AAATTTGC 134711 || | ||| Sbjct 31279 AACTGTGC 31272 >seq21 Length=78807 Score = 98.7 bits (108), Expect = 1e-15 Identities = 481/747 (64%), Gaps = 30/747 (4%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 ||||||| | || ||| | ||| || || | |||| ||||||||||| ||| || Sbjct 61490 CGCCATTCTGGAGGCTCAGACCGAGACGGGCAACCCGTTTATGCTGTACAAGGACCACTG 61549 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 ||| ||| ||||| || | ||| |||||||||| | || ||| |||||| | || Sbjct 61550 TAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACCTGTGCACCGA 61609 Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411 ||| | ||||| | |||||||| || || ||||| ||||| || || ||| || | | Sbjct 61610 GATTATCGAGTACTGTGCGCCCGATGAGGTTGCCGTATGCAACCTGGCTTCGCTGGCTCT 61669 Query 8412 AAACGCGTTCGTTGATCGAC-GCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCG 8470 ||||| || || | || | ||| |||||||| || | | ||| | Sbjct 61670 GCCGGCGTTTGTCGA-CTACAACAAGAACGAGTACGACTT---CCAGAAGCTACACGAGG 61725 Query 8471 T--GCAA-GTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGG 8527 | ||| || || ||||| | | ||||||||||| ||||| || ||| || Sbjct 61726 TCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCATTGACGTCAACCACTACCCCGTGC 61785 Query 8528 AAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGG 8587 || || | | |||||||||||| | || |||| || || || || ||||||| Sbjct 61786 CTGAGGCTCACAACAGCAACATGCGCCACCGTCCTATTGGTGTTGGTGTCCAGGGTCTGG 61845 Query 8588 CCGACGCGTT--TGCCATGTTGCGCCTCCCCTACGA--AAGCCAAGAAGCGCGCATGCTC 8643 | || || || || | | ||||| | || | || ||| || || |||| |||| Sbjct 61846 CTGATGCTTTCCTGGC--GCTGCGCATGCCTTTTGAGTCGGCC--GAGGCTCGCAAGCTC 61901 Query 8644 AACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCC-AGCTGTCAACTTGC 8702 |||| | || ||||| | || ||| || | ||| | || | |||| Sbjct 61902 AACACGCAGATCTTTGAAACCATCTACCACGCTGCTCTGACGGCCTCGATG-GATATTGC 61960 Query 8703 CCGAGAATTGGGCACGTACGAATCGTACGCGGGC-AGCCC---TGCCAGCCGCGGAATAT 8758 | || ||| || ||| |||||| |||| |||| | |||| || || Sbjct 61961 CAAGGAGGAGGGTACCTACTCTACGTACGAGGGCTCGCCCGTTTCCCAG----GGCATCC 62016 Query 8759 TGCAATACGACATGTGGAATGTCACGCCCACC--TCTTTGTGGAATTGGAGCGATTTGAA 8816 |||| | |||||||||||||||||| |||| | || || ||| | || | | | Sbjct 62017 TGCAGTTCGACATGTGGAATGTCACTCCCAGCGACCTCTG-GGACTGGGTGTCGCTCAAG 62075 Query 8817 ACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGC 8876 || | || || |||| ||||||| |||||| || | || |||||| || || Sbjct 62076 GAGC-AGATCAAGCAGCACGGTGTGCGCAACTCGCTGCTGCTTGCGCCCATGCCGACGGC 62134 Query 8877 CACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTA 8936 || || | || || |||| |||||||| | ||| ||||||| ||| |||| | || Sbjct 62135 CAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCGTACACTTCCAACATCTA 62194 Query 8937 CGTGAGACGAGTGTTGGCCGGCGATTT 8963 | | | || ||| |||| ||||| || Sbjct 62195 CCAGCGTCGTGTGCTGGCTGGCGAGTT 62221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394982243320