Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq90 98.7 8e-16 >seq90 Length=200924 Score = 98.7 bits (108), Expect = 8e-16 Identities = 371/570 (65%), Gaps = 24/570 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||| |||||||| || || ||||||| || ||||| || || || ||||| || Sbjct 193868 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACGGCCGAGGAGATTGATCTG 193927 Query 43790 ACTAAAGACTTAGCAC-ATTGGATT----GCATTAAAACCACAAGAAAAACATTTTATAT 43844 | || || | ||| | |||| |||| || | | || || |||| || | Sbjct 193928 TCCAAGGATCTC-CACGACTGGAACAACCGCATGAACAAGG-ATGAGAAGTATTTCATCT 193985 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 | || |||| ||||||||||| ||||| || ||||| || || ||||| | Sbjct 193986 CGCACGTCCTGGCCTTTTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTTGAGC 194045 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 | || || || || || | || || || || || || || || || || || | Sbjct 194046 GTTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 194105 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TG 44021 | || || || || ||||| | |||| || || || || ||||||||||| || || Sbjct 194106 TGGAGAACATCCACTCGGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGAGCCTG 194165 Query 44022 GGCACGAGAAGCATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACATAAA 44080 || | | ||| | |||| || || || || | || | ||||| || | || Sbjct 194166 CCCA-GCGCAGCTAC--CTGTTCAACGCCATCGACACCATTCCCTGC-ATCCGCCGCAAG 194221 Query 44081 GCAGACTGGGCCCTTAAATGGATAAATTCAAAT---GATT---CTTTTGGAGAACGACTT 44134 || ||||||||||| || ||||| ||| || || | | |||| | || || Sbjct 194222 GCCGACTGGGCCCTCAAGTGGAT---TTCCGATCGCGAGTCGACCTTTGCCCAGCGTCTG 194278 Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | || || ||||| ||||| || || | ||||| |||| || ||| Sbjct 194279 GTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGG 194338 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 | || || ||| ||||||| || |||| ||||| || ||| | || || || Sbjct 194339 CTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGAC 194398 Query 44255 GAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 |||||| | || ||| ||||| ||| || Sbjct 194399 GAAGGCCTGCACACCGACTTTGCCTGCCTG 194428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453379398705