Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq90 98.7 8e-16
>seq90
Length=200924
Score = 98.7 bits (108), Expect = 8e-16
Identities = 371/570 (65%), Gaps = 24/570 (4%)
Strand=Plus/Plus
Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789
|| ||||| |||||||| || || ||||||| || ||||| || || || ||||| ||
Sbjct 193868 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACGGCCGAGGAGATTGATCTG 193927
Query 43790 ACTAAAGACTTAGCAC-ATTGGATT----GCATTAAAACCACAAGAAAAACATTTTATAT 43844
| || || | ||| | |||| |||| || | | || || |||| || |
Sbjct 193928 TCCAAGGATCTC-CACGACTGGAACAACCGCATGAACAAGG-ATGAGAAGTATTTCATCT 193985
Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904
| || |||| ||||||||||| ||||| || ||||| || || ||||| |
Sbjct 193986 CGCACGTCCTGGCCTTTTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTTGAGC 194045
Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964
| || || || || || | || || || || || || || || || || || |
Sbjct 194046 GTTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 194105
Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TG 44021
| || || || || ||||| | |||| || || || || ||||||||||| || ||
Sbjct 194106 TGGAGAACATCCACTCGGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGAGCCTG 194165
Query 44022 GGCACGAGAAGCATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACATAAA 44080
|| | | ||| | |||| || || || || | || | ||||| || | ||
Sbjct 194166 CCCA-GCGCAGCTAC--CTGTTCAACGCCATCGACACCATTCCCTGC-ATCCGCCGCAAG 194221
Query 44081 GCAGACTGGGCCCTTAAATGGATAAATTCAAAT---GATT---CTTTTGGAGAACGACTT 44134
|| ||||||||||| || ||||| ||| || || | | |||| | || ||
Sbjct 194222 GCCGACTGGGCCCTCAAGTGGAT---TTCCGATCGCGAGTCGACCTTTGCCCAGCGTCTG 194278
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || ||||| | || || ||||| ||||| || || | ||||| |||| || |||
Sbjct 194279 GTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTTGCCTCCATTTTCTGG 194338
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
| || || ||| ||||||| || |||| ||||| || ||| | || || ||
Sbjct 194339 CTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACGAGCTGATTTCGCGCGAC 194398
Query 44255 GAAGGCTTACATTGCGATTTTGCTTGCTTG 44284
|||||| | || ||| ||||| ||| ||
Sbjct 194399 GAAGGCCTGCACACCGACTTTGCCTGCCTG 194428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397453379398705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |