Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq21 102 3e-16
seq90 89.7 2e-12
>seq21
Length=78807
Score = 102 bits (112), Expect = 3e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||| || || || ||| | ||||||||||||||| || |||||||||||||| || ||
Sbjct 61127 CGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCTACGTCGATCAGGGCGG 61186
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
| ||| ||||| || || || |||| |||||||||||||||||||| ||
Sbjct 61187 CAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCGGA 61237
Score = 96.9 bits (106), Expect = 1e-14
Identities = 173/250 (69%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 256124 CAGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGC 256183
|||||| || ||||||| |||||||||||| | | ||||||||||| || ||||||
Sbjct 62079 CAGATCAAGCAGCACGGTGTGCGCAACTCGCTGCTGCTTGCGCCCATGCCGACGGCCAGC 62138
Query 256184 ACCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCG 256243
|| | || || ||||| ||| || || |||| || ||| ||||| ||| | |
Sbjct 62139 ACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCGTACACTTCCAACATCTACCAG 62198
Query 256244 CGCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTA 256303
|| || || | | ||||||||| || || |||| || ||| || || |||||
Sbjct 62199 CGTCGTGTGCTGGCTGGCGAGTTCCAGGTTGTTAACCCGTGGTTGTTGCGTGATTTGGT- 62257
Query 256304 CGA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAATTCGGGCCCGTGGGTCGGT 256362
||| || ||||||||| || || ||| | | ||||| ||| | ||| |||||
Sbjct 62258 CGACCTGGGTCTGTGGTCGGATAACATGAAGAACCGCATCATTGCTGAGAATGGTTCGGT 62317
Query 256363 GCAGAACATT 256372
||||| |||
Sbjct 62318 CCAGAATATT 62327
>seq90
Length=200924
Score = 89.7 bits (98), Expect = 2e-12
Identities = 123/171 (72%), Gaps = 1/171 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||| | | |||| || || || ||||| | ||||| || | || || ||| |||
Sbjct 194263 CTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 194322
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| |||||||| |||||| || |||||||| || |||| ||||||||||||| ||||
Sbjct 194323 T-GCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCCAACG 194381
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
| ||||| || ||||| || |||| |||||| ||||| || ||||
Sbjct 194382 AGCTGATTTCGCGCGACGAAGGCCTGCACACCGACTTTGCCTGCCTGCTCT 194432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588324990349745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |