Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq21 203 4e-47
seq103 95.1 2e-14
>seq21
Length=78807
Score = 203 bits (224), Expect = 4e-47
Identities = 906/1407 (64%), Gaps = 55/1407 (4%)
Strand=Plus/Minus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | ||||| || || ||||| || || || |||| || || | |||
Sbjct 62196 GGTAGATGTTGGAAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGC 62137
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| || || | || || ||| || | ||| | || |||||| | |
Sbjct 62136 TGGCCGTCGGCATGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCT 62077
Query 110826 CCTTGAGA-ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
||||||| ||| ||||||| || | ||| || | || |||| ||||||| |||||
Sbjct 62076 CCTTGAGCGACA-CCCAGTCCCAGAGGTCGCTGGGAGTGACATTCC-ACATGTCGAACTG 62019
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
|| | || ||||| |||| || ||||| | || |||| ||| | | | ||
Sbjct 62018 CAGGATGCCCTGGGAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGC 61959
Query 110944 CAATTCACAGCTCG-CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002
| || || | | || ||| | ||||| || |||||||||||||| | | || |
Sbjct 61958 AATATC-CATCGAGGCCGTCAGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGA 61900
Query 111003 TCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGC 111057
|| || || | || ||||| |||| |||| || ||| |||| ||
Sbjct 61899 GCTTGCGAGCCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAG-----CATCAGC 61845
Query 111058 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 111117
||||| || ||||| | ||||||||| | ||| ||||| || || | | | || |||
Sbjct 61844 CAGACCCTGGACACCAACACCAATAGGACGGTGGCGCATGTTG--CTGTTGTG-AGCCTC 61788
Query 111118 A---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174
| ||||| || || |||||||| ||||| || || ||||| ||| ||
Sbjct 61787 AGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGT 61728
Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 111234
|| || || || || | | || | | | | | | |||| || || ||
Sbjct 61727 GACCTCGTGTAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAG 61668
Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294
|| | || |||| ||||| || || |||||| | |||||| | ||| ||
Sbjct 61667 AGCCAGCGAAGCCAGGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTC 61608
Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354
|| || | |||||| || || || |||| ||||| ||||| ||||| ||| ||
Sbjct 61607 GGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACA 61548
Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414
|||||||| ||||| | || | |||||||| ||||| | | ||||| || |
Sbjct 61547 GTGGTCCTTGTACAGCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTA 61488
Query 111415 CCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473
||| | | || | | || | | | | || | | || |||||| ||||||| || ||
Sbjct 61487 CCATAGCTTCTGGGCCTTGATCGACG-CGCGGCCACGGCCCTCCTGCTCGTACCTTTCGT 61429
Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533
| || || ||||||||||| || ||| | || || || || || || || |
Sbjct 61428 ACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACA 61369
Query 111534 AAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
|||| ||| | || ||| |||||| ||||||||||| ||||| || ||||||||
Sbjct 61368 TCAGAGTCCAGT--CCGAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAG 61311
Query 111592 GG--ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| | |||| || || | || |||| || | || ||||| || | |||
Sbjct 61310 CGCCAGGAAA--AGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCA 61253
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703
||||| || | | |||||||||||| ||||| || || | || | || | |
Sbjct 61252 AGGAAGTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGC 61193
Query 111704 TT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762
|| | | ||||| |||| || ||||| || ||| ||| || || || ||||| ||
Sbjct 61192 TTGTTGCCGCCC----TGATCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGG 61137
Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACA 111820
||| ||||| | || ||| || || || || |||||| | |||| | |
Sbjct 61136 AATGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTACGAG--CCAGTGGCACGGATG 61079
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
||||| | | || ||||| || ||| ||| ||||| ||||| | | |||
Sbjct 61078 CGATGGACATTGAGTCCGATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGA 61019
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| | || || || | ||| ||||| ||||| || | | ||||||||| |||| |
Sbjct 61018 GTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGC 60959
Query 111941 TGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999
|| || || || |||||||| ||||| || || || | ||||| ||| | | ||||
Sbjct 60958 TG-GGCCTGGGGCGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGGGTGA--AGAACTTG 60902
Query 112000 --GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT-TCCCCGTGGATGCCGAT 112056
||||| || ||| ||||| | ||| ||||| ||| || || ||||| |
Sbjct 60901 CTCGACATGAGGTTGTACGTCTCAATAACACGATCAA-CTCTGTCGCCCCAAATGCCAAC 60843
Query 112057 TGCGACCCGCATGAACATGTACTGTGG 112083
|| || ||||| | ||||| ||| ||
Sbjct 60842 AGCCACACGCATAATCATGTGCTGGGG 60816
>seq103
Length=50471
Score = 95.1 bits (104), Expect = 2e-14
Identities = 208/308 (68%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 11623 GCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTC 11682
||| | |||||||||||| || || |||||||| || || ||| | || || | |
Sbjct 34746 GCCAATCGCATCAATCTCGTCGATAAAGACAATGCACGGCGCATTCTTACGCGCCGTGGC 34687
Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740
||| | || || || | | |||||| || ||||||||||| ||||| | | |
Sbjct 34686 AAACAAGTCACGCACTCGCGACGGACCCACGCCGACAAACATCTCGACAAACTCCGACCC 34627
Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800
|| || | ||| | ||| || || || || ||||| |||| ||| | || |||
Sbjct 34626 GCTGA-CGCTGAA-GAACGGCACGCCCGACTCGCCCGCCGTGGCCTTGGCCAACAGCGTC 34569
Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCA 11860
|||||||| || ||| ||||| |||| ||| || || ||||||||||| || |
Sbjct 34568 TTTCCCGTTCCCGGCGGACCCGACAGAATGGCACCGCGCGGGATCTTGGCGCCCAGCCGC 34509
Query 11861 AAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCG 11920
| | | | ||||| | |||||| || | ||||| ||| || || | |||||| ||
Sbjct 34508 ACAAACTTTTCGGGCTTCTTGAGGAACTGCACAAACTCCATAATCTCCACCTTGGCCTCG 34449
Query 11921 TCAATCCC 11928
|| || ||
Sbjct 34448 TCCATGCC 34441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628027752933600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |