Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq21 203 4e-47 seq90 149 8e-31 >seq21 Length=78807 Score = 203 bits (224), Expect = 4e-47 Identities = 1048/1652 (63%), Gaps = 45/1652 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| || Sbjct 62539 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTGGTA 62480 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | |||| | || || | |||| || ||| | || || || ||||| ||| Sbjct 62479 ATCTTGCCCATAGTAGGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAAG 62420 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGT 118012 || || || || ||||| | |||| || | | ||| || ||||||||||| Sbjct 62419 GCACCACGGTCAGCAGCCATCTG---CACAACCGT-ACGTTGCGAAATCTCCCACACAGT 62364 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGA-TATTTTGGATGGATCCACCCG 118071 | |||| || ||| || || || ||||| | | || |||| |||| || ||| | Sbjct 62363 CTTGTACAGCGCCTTGATGTCGTCAGGGATG-CTAGGAATATTCTGGACCGAACCATTCT 62305 Query 118072 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131 | | ||| | | |||||| | | ||||| ||||| | | | ||| || Sbjct 62304 CAGCAATGATGCGGTTCTTCATGTTATCCGACCACAGACCCAGGTCGACCAAATCACGCA 62245 Query 118132 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 118191 | | || ||||| ||||| || || || || | | | ||||| |||| Sbjct 62244 ACAACCACGGGTTAACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAGATGTTGG 62185 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 118251 ||||| ||||| |||||||| ||||| |||| || || | ||| ||| || |||| Sbjct 62184 AAGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCA 62125 Query 118252 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGT 118311 |||| || | || || ||| || | ||| | | | | || | |||||||| | Sbjct 62124 TGGGCGCAAGCAGCAGCGAGTTGCGCACACCGTGCTGCTTGATCTGCTCCTTGAGCGACA 62065 Query 118312 CCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370 ||||||| || | ||| | | | | |||||| || ||||| ||||| || ||| Sbjct 62064 CCCAGTCCCAGAGGTCGCTGGGAGTGACATT-CCACATGTCGAACTGCAGGATGCCCTGG 62006 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAG 118427 || | ||||| ||||| | || || | ||||| ||| || | || ||| Sbjct 62005 GAAACGGGCGAGCCCTCGTACGTAGAGTAGGTACCCTCCTCCTTGGCAATATCCATCGAG 61946 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA--TTGCCTTGG 118485 || | || || ||||| || || |||||||| || | | || | |||| | Sbjct 61945 GCCGTC---AGAGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTGAGCTTGCGA--G 61891 Query 118486 CCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 118545 ||||| | || ||||| | | || | | || |||| || ||||| ||||||| Sbjct 61890 CCTCGGCCGACTCAAAAGGCATGCGCAGCGCCAGGAAAGCATCAGCCAGACCCTGGACAC 61831 Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAA 118602 | | ||||| || || || | ||| || || |||| ||| |||||| || Sbjct 61830 CAACACCAATAGGACGGTGGCGCATGTTGCTGTTGTGAGC---CTCAGGCACGGGGTAGT 61774 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 || || || | | || || || |||||||| |||| || || |||| Sbjct 61773 GGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGTAGCT 61714 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722 | | | | || | | | | | | |||| || || || || | || |||| Sbjct 61713 TCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGCCGGCAGAGCCAGCGAAGCCA 61654 Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782 | || || || | |||||| || |||||| ||||| || ||||||| ||| | Sbjct 61653 GGTTGCATACGGCAACCTCATCGGGCGCACAGTACTCGATAATCTCGGTGCACAGGTTGG 61594 Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842 | || |||||||||| |||||| || || ||| |||||| |||||||| | Sbjct 61593 AGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTACA 61534 Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCA 118901 |||| | || | |||||||| || || | || ||||| || | ||| | | || | Sbjct 61533 GCATAAACGGGTTGCCCGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGCTTCTGGG 61474 Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961 || | | | ||| | | || ||||| | ||||||| || ||| || || |||||| Sbjct 61473 CCTTGATC-GACGCGCGGCCACGGCCCTCCTGCTCGTACCTTTCGTACAGAGCCTCAAAC 61415 Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 119021 || || || | || | || || || || | ||||| | |||| ||| | Sbjct 61414 TCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCC 61355 Query 119022 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 119081 || |||||| ||||||||||||||||| |||||||| |||||| ||| || || Sbjct 61354 GAGTTCTTCTCAACACGCTTCATGAAGAGGTCAGGGATCCACAGCGCCAGGAAAAGGTCA 61295 Query 119082 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141 || ||| | || || | || || || |||| || | ||||| | | |||| Sbjct 61294 CGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGTCAAACACATCC 61235 Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTGG 119195 ||||||||||| |||||||| | || | | || | | || || |||| Sbjct 61234 GCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACC---AGGGCGCTTGTTGCCGCCCTGA 61178 Query 119196 TTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGG 119255 | || || | |||||| ||| || ||||| ||||| ||||||||||| | ||| Sbjct 61177 TCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTA 61118 Query 119256 CCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAA 119313 || || || || ||| ||||| | | |||| | || |||| | | || | Sbjct 61117 CCGTTGGTGCCGGCAATGTACGAGCC--AGTGGCACGGATGCGATGGACATTGAGTCCGA 61060 Query 119314 TACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 119373 |||| || ||| ||| ||||| || || | ||||| | |||| || || |||| Sbjct 61059 TACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGA 61000 Query 119374 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGT-GTACCA 119432 ||||||| |||| | | | |||||||| |||| || |||||||| |||||| Sbjct 60999 TCGAGTCTTCCTTCATGTCAACCAGGAAGCAAGATGACAGCTG-GGCCTGGGGCGTACCA 60941 Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 |||||||| ||||| || | |||||| |||| Sbjct 60940 GCGTTGAACAGAGTGGGCGAGGCGTGGGTGAA 60909 >seq90 Length=200924 Score = 149 bits (164), Expect = 8e-31 Identities = 526/816 (64%), Gaps = 23/816 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| |||||||| |||||||| ||||| ||| ||| ||| |||||||| Sbjct 194709 TAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATG 194650 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || ||||| |||||| | ||| | | | | || | | ||| | || Sbjct 194649 AAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTGTCGTTGCCGAGGGCAACC------AGC 194596 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | ||| |||||||||||| ||| |||| |||||| |||| ||| Sbjct 194595 AGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGCAGG 194536 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || || || | ||| |||| |||||| | || || || | ||| Sbjct 194535 GCGCAGGGCAGGGCCTCGGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATT 194476 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021 | | || | || | ||| || | ||| || | |||||| |||||| Sbjct 194475 TCCTCAACGAGCTTCTTGCTGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAAG 194416 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| || || ||||| || || || || || || || ||| |||||| ||||| Sbjct 194415 TCGGTGTGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATC 194356 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 ||||| ||||| || ||||||||| | ||| | ||| ||||||||||| ||||| Sbjct 194355 AGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCG 194296 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCAC 130198 || || || || | ||||||| ||||||| |||| ||| || |||| Sbjct 194295 ACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG---TCGACTCGCGATCGGAAATCCAC 194239 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258 || | ||||| | ||||| ||| || || | ||| | ||| || | || || Sbjct 194238 TTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAGG 194179 Query 130259 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCA 130318 | | | | || || ||||||||| | || ||||| || || || || Sbjct 194178 TAGCTGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAG 194119 Query 130319 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 130377 |||| | | ||| || | ||| | ||||||| |||| || ||| ||||| || Sbjct 194118 TGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGAC 194060 Query 130378 CTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAA 130437 ||| | | ||| | | | ||||| ||||| || || || |||||||||| Sbjct 194059 CTCGCCCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAA 194000 Query 130438 CGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTC 130494 ||||||| | | ||||| | || |||| || ||||| || | |||||||||| Sbjct 193999 GGCCAGGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTG 193940 Query 130495 AAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || ||||| | |||||| || ||||| Sbjct 193939 GAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 193904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431017831960