Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq21 203 4e-47 seq90 93.3 5e-14 >seq21 Length=78807 Score = 203 bits (224), Expect = 4e-47 Identities = 903/1405 (64%), Gaps = 55/1405 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278 || ||| ||||| | ||||| ||||| | || ||| ||||| |||| ||||| | Sbjct 60816 CCCCAGCACATGATTATGCGTGTGGCTGTTGGCATT--TGGGGC-GACAGAGTTGATCGT 60872 Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336 || | ||||| ||| || ||||| |||| | | ||| ||||| | || || | Sbjct 60873 GTTATTGAGACGTACAACCTCATGTCGAGCAAGTTCT--TCACCCACGCCTCGCCCACTC 60930 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 | ||||| |||||||| || |||| |||| ||||||||| | | || |||| Sbjct 60931 TGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGGTTGACATGAAGG 60990 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456 | ||||| ||| | || || || | ||||| | | ||||| ||||| ||| || Sbjct 60991 AAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGG 61050 Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGG 104514 | || ||||| || | | ||||| | | |||| | |||||| || || Sbjct 61051 CCGGTGGTATCGGACTCAATGTCCATCGCATCCGTGCCACTGG--CTCGTACATTGCCGG 61108 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || ||| || | ||||| ||||| ||||| || || || ||| ||| || || Sbjct 61109 CACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCG 61168 Query 104575 CTATGTAAATCAAGCTGGGCGTCGA-AAGGGATCTA------TCGCAGTCTATCTTGAGC 104627 ||| || |||| ||||| | | ||| | || | || | || || |||| Sbjct 61169 CTACGTCGATCA----GGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGC 61224 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||||||||| | | || |||||||| |||| ||||| || | ||||||| Sbjct 61225 CGTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGG 61284 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || || ||| || || ||||| || || |||||||||||| | |||| Sbjct 61285 TCCGCGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGTGTTG 61344 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||| | ||| |||| | || || || || ||||| || | || | Sbjct 61345 AGAAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCT 61404 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCG 104866 || ||||||||||| || || ||| || ||||||| | || || || ||| | ||| Sbjct 61405 ACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAGGAGGGCCGTGGCCGC-GCG 61463 Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || | | || | || | | ||| | || ||||| || |||| |||||||| || | Sbjct 61464 TCGAT-CAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACGGGCAA 61522 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | ||||| ||||| ||| |||||||| ||||| || || ||||| |||| Sbjct 61523 CCCGTTTATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTGGGCAC 61582 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 ||| || ||||| || || || || || | || | | |||||| || Sbjct 61583 CATCCGCAGCTCCAACCTGTGCACCGAGATTATCGAGTACTGTGCGCCCGATGAGGTTGC 61642 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACAT 105104 || || ||||| || || | ||||| || || ||| || | || | || || | Sbjct 61643 CGTATGCAACCTGGCTTCGCTGGCTCTGCCGGCGTTTGTCGACTACAACAAGAACGA-GT 61701 Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164 || | | || || ||||| || || || ||| ||||| ||| | | | Sbjct 61702 ACGACTTCCAGAAGCTACACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCA 61761 Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 |||| || |||||||| |||| |||| || || ||| | ||||||| Sbjct 61762 TTGACGTCAACCACTACCCCGTGCCTGAG---GCTCACAACAGCAACATGCGCCACCGTC 61818 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA---- 105277 | |||||| | ||||| |||||||| || |||| ||| || ||| |||| Sbjct 61819 CTATTGGTGTTGGTGTCCAGGGTCTGGCTGATGCTTTC-----CTGGCGCTGCGCATGCC 61873 Query 105278 -TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||||| || | ||| || | |||| ||| || ||||| ||||| || ||||| Sbjct 61874 TTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCAGATCTTTGAAACCATCTACCACGC 61933 Query 105337 CGCTCTTGAGG---CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 ||||| || ||| | | | ||| || ||| || ||| | || || | || Sbjct 61934 TGCTCTGACGGCCTCGA-TGGATA-TTGCCA-AGGAGGAGGGTACCTACTCTACGTACGA 61990 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC- 105452 ||| || || | ||| || || | || || || || |||| |||| || | || ||| Sbjct 61991 GGGCTCGCCCGTTTCCCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACTCCCAGCG 62049 Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | || ||||||| | |||||||| | |||||| || | ||| | || ||| | Sbjct 62050 ACCTCTGGGACTGGGTGTCGCTCAAGGAGCAGATCAAGCAGCACGGTGTGCGCAACTCGC 62109 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | || | || || ||||| || ||| ||| | || || |||| || || || |||| Sbjct 62110 TGCTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCT 62169 Query 105573 TTGAACCCTACACGACGAACATCTA 105597 | || || ||||| | |||||||| Sbjct 62170 TCGAGCCGTACACTTCCAACATCTA 62194 >seq90 Length=200924 Score = 93.3 bits (102), Expect = 5e-14 Identities = 341/524 (65%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| || || ||| | ||||| || |||||| | |||| ||||| | | | || Sbjct 193904 TGGACGGCCGAGGAGATTGATCTGTCCAAGGATCTCCACGACTGGAACAACCGCATGAAC 193963 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 | |||| ||| | ||||| || ||||||| || ||||||| || || || ||| Sbjct 193964 AAGGATGAGAAGTATTTCATCTCGCACGTCCTGGCCTTTTTTGCTGCCTCGGACGGCATT 194023 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||||| | | | || | | ||||| || |||| | || || | | Sbjct 194024 GTCAACGAGAACCTGGTTGAGCGTTTCTCGGGCGAGGTCCAGATCCCC-GAGGCCCGCTG 194082 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| | | | || |||||| ||| |||| Sbjct 194083 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCGGAGACGTACTCGCTGCTCA 194141 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAACA 94734 | |||| ||| || ||||| ||| || | ||| | || || | |||||| | || Sbjct 194142 TCGACACGTACATCAAGGAGCCTGCCCAGC-GCAGCTACCTGTTCAACGCCATCGACACC 194200 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 94791 |||| || || | || || || ||||| | |||||| || ||| ||||| Sbjct 194201 ATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTTCCGATCGCGAGTCG 194260 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 ||||||| |||| || | || ||||| || ||||| ||||||||||| || Sbjct 194261 A---CCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGC 194317 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||| | | |||| ||||| ||||| ||||| ||||| ||||| ||| ||| Sbjct 194318 GCCTTTGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCC 194377 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| || || || ||||| || || ||| || ||||| Sbjct 194378 AACGAGCTGATTTCGCGCGACGAAGGCCTGCACACCGACTTTGC 194421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256855698840