Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq13 138 3e-27
seq101 105 2e-17
seq88 105 2e-17
seq273 98.7 3e-15
seq131 96.9 1e-14
>seq13
Length=236849
Score = 138 bits (152), Expect = 3e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || ||||||||||| || || || || || ||
Sbjct 135579 CATACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 135638
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||||||||| || || ||||| || || ||||| ||||| || ||
Sbjct 135639 CGAGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGG 135698
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || ||||| || || | || || | ||
Sbjct 135699 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTC 135758
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||| ||||| || || || ||||| ||||||||
Sbjct 135759 CACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 122 bits (134), Expect = 3e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| || || || || ||||| || || || || || || || | ||| || |||||
Sbjct 135370 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCC 135429
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| ||||| ||||| || || ||||| || || || |||
Sbjct 135430 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 135489
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || | || ||||| || || | || || | || || || || || | |||
Sbjct 135490 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTC 135549
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || || ||||| ||||||||
Sbjct 135550 TTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 120 bits (132), Expect = 9e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || ||||||||||| || || || || || ||
Sbjct 135807 CATACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 135866
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||||||||| || || ||||| || || | ||| ||||| || ||
Sbjct 135867 CGAGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGG 135926
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || || || || || | ||| || | ||
Sbjct 135927 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTC 135986
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||||| || || | ||||| ||||| || || || ||
Sbjct 135987 GACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 136025
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || ||||||||||| || || || || || ||
Sbjct 136091 CATACCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 136150
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||| || ||||| || || || || ||||||||||| || || ||||| || ||
Sbjct 136151 GGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGG 136210
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || ||||| || || | || || || || || | || || | |||
Sbjct 136211 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTC 136270
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| ||||| || | ||||| || || | |||
Sbjct 136271 CACCTCAAGGGTGATGGTCTTGCCCGTCACTGT 136303
>seq101
Length=191744
Score = 105 bits (116), Expect = 2e-17
Identities = 107/139 (77%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| |||||||| | || || ||| || || | ||||||||| || |||||||| ||
Sbjct 165381 CGAGGCACACCCAGGGTGACGTTC---TTGGAAGAAACACCAGCGAAATGGAAAGTGTTC 165437
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||||| |||||||||||| |||||||| |||| || |||||||| ||
Sbjct 165438 AGCGTCATCTGAGTAGCGGGCTCACCAATCGACTGCGCAGCAAGCACACCAACCATCTCG 165497
Query 377578 CCAGGATTGACAATAGCCT 377596
||||| |||| | |||||
Sbjct 165498 CCAGGGTTGATGAAAGCCT 165516
>seq88
Length=56780
Score = 105 bits (116), Expect = 2e-17
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||| || || || || ||||| |||||
Sbjct 28287 TTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 28228
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || |||||||| || ||||| || || |||||||| || || | || ||||| ||
Sbjct 28227 AGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 28168
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | || || | ||||| || || |||| ||||| || || || || || || |||
Sbjct 28167 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 28108
Query 140730 ATCTGCAT 140737
||||||||
Sbjct 28107 ATCTGCAT 28100
>seq273
Length=18612
Score = 98.7 bits (108), Expect = 3e-15
Identities = 185/272 (68%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
||||| | ||||| || || || || || ||| | |||||| || || || || ||
Sbjct 15149 GCTGTCGTCACTGTTCCCGCTTACTTCAACGATTCTCAGCGTCAGGCCACCAAGGACGCC 15090
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| ||||| || | || ||||| | || || || || |||||||| || || |||
Sbjct 15089 GGTCTTATTGCCGGTCTTAACGTTCTGCGTATCATCAACGAGCCCACTGCCGCTGCCATT 15030
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || ||||| || | | || || || | || || || ||| | |||
Sbjct 15029 GCCTACGGTCTTGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGATCTGGGT 14970
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
|||||||| || ||||| || || || || |||| || || || || || || || |
Sbjct 14969 GGTGGTACCTTCGATGTCTCTCTGCTGACCATTGAGGATGGTATCTTCGAGGTCAAGTCC 14910
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGA 349881
|| ||||||||||| || || ||||| || ||
Sbjct 14909 ACCGCTGGTGATACCCACCTGGGTGGTGAGGA 14878
>seq131
Length=44026
Score = 96.9 bits (106), Expect = 1e-14
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| ||||| || || || || | || || ||||| ||||| || || |||||||||||
Sbjct 31457 TTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 31398
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||| ||||| || || ||||| || || || ||||| || || | || || || ||
Sbjct 31397 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 31338
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|||| || || | || || || || |||| ||||| || || || || || || |||
Sbjct 31337 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 31278
Query 140730 ATCTGC 140735
| |||
Sbjct 31277 CTGTGC 31272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515243896919423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |