Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 293 3e-74 seq90 147 2e-30 seq497 104 3e-17 >seq21 Length=78807 Score = 293 bits (324), Expect = 3e-74 Identities = 508/726 (70%), Gaps = 18/726 (2%) Strand=Plus/Plus Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290 ||||| |||||||||| || | ||| ||| |||| ||| || |||||| |||| Sbjct 60870 CGTGTTATTGAGACGTACAACCTCATGTCGAGC---AAGTTCTTCACCCACGCCTCGCCC 60926 Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350 || |||||||||||||||||| || | ||| |||| ||||||||||| | ||| Sbjct 60927 ACTCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGGTTGACATG 60986 Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410 ||||| ||||||||||| ||||| ||||| || |||||| ||||| ||||||||| Sbjct 60987 AAGGAAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAG 61046 Query 53411 TGGTCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCA 53468 | | ||||||||||| || | || || | || ||||||| | ||| | || Sbjct 61047 ATGGCCGGTGGTATCGGACTCAA-TG-TCCATCGCATCCGTGCCACTGGCTCGTACATTG 61104 Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528 || || ||||| | || | || ||| | || ||||| || || ||||||||||| | Sbjct 61105 CCGGCACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTG 61164 Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588 |||| |||||| | ||||| || |||||| || | || ||||| ||||| |||| Sbjct 61165 CCCGCTACGTCGATCAGGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGC 61224 Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648 |||||||||| || | | || || || || ||||| ||| || || | || ||| Sbjct 61225 CGTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGG 61284 Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708 | ||| ||||||||| || || |||||||| || |||||||||||| | || | Sbjct 61285 TCCGCGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGTGTTG 61344 Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTC 53767 ||||| || ||| ||| ||||||||||| ||||||||||| ||||| | | || | Sbjct 61345 AGAAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTG-C 61403 Query 53768 TACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGA 53825 ||||| ||||||||| | | |||| | |||| |||| ||||||| | Sbjct 61404 TACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAG--GAGGGCCGTGGCCGCG 61461 Query 53826 AGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAA 53885 | | ||||||| | || ||||| | || || || || ||| |||||||| | Sbjct 61462 CGTCGATCAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACGGGCA 61521 Query 53886 CGCCGTACATGTGCTACAAGGA-TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 |||| ||| |||||||| | || ||| |||||||||||||||||| | ||| Sbjct 61522 ACCCGTTTATGCTGTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCTGGGC 61580 Query 53945 GTCATC 53950 |||| Sbjct 61581 ACCATC 61586 Score = 118 bits (130), Expect = 1e-21 Identities = 147/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785 |||||| | | ||| ||| |||||||||||| | || | | || || | | ||| Sbjct 62347 TCAAGGCGCTGTACAAGACTGTGTGGGAGATTTCGCAACGTACGGT-TG-TGCAGATGGC 62404 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 |||||| |||||||| | ||||||||||| ||||| || |||||| |||| || | || Sbjct 62405 TGCTGACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATCCACATGAAGGACCC 62464 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | | ||| |||| | | | ||||||||| ||| |||||| ||| ||||||||||| Sbjct 62465 TACTATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGG 62524 Query 55906 TATGTACTATCTGCGGAC 55923 |||||||| ||||| || Sbjct 62525 CATGTACTACCTGCGTAC 62542 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| ||||| | ||||| ||||| || || ||| | ||||| |||||||| Sbjct 62100 CGCAACTCGCTGCTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAAC 62159 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||||||||| |||||||||||| ||| || || || || ||| Sbjct 62160 AACGAGTGCTTCGAGCCGTACACTTCCAACATCTACCAGCGTCGTGTGCTGGCTGGCGAG 62219 Query 55604 TT 55605 || Sbjct 62220 TT 62221 >seq90 Length=200924 Score = 147 bits (162), Expect = 2e-30 Identities = 544/837 (65%), Gaps = 34/837 (4%) Strand=Plus/Minus Query 74472 ACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGAAA 74531 || ||||| ||||| ||||||||||| || ||| ||||||||||||||| |||| || Sbjct 194700 ACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATGAAGTCAAAG 194641 Query 74532 GGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGGCGATCCGCC 74588 |||||| | | | ||| | ||| || || | ||| || || || || Sbjct 194640 GGGTTCGTGGAGCGGTAGAC---CTTGTCGTTGCCGAGGGCAACCAGCAGACGGTCGGCG 194584 Query 74589 ACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCACGGCAGT 74648 ||||| | |||||||||| |||| | || | |||||||| || ||| ||||| Sbjct 194583 ACAAACTCAATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGCAGGGCGCAGGGCAGG 194524 Query 74649 GCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGAATGT-C 74707 |||||||| | || || | || | || || || || | | || | | Sbjct 194523 GCCTCGGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATTTCCTCAACGAGC 194464 Query 74708 TT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATG 74764 || || |||| || | ||||||| ||| | ||| | || |||||| || || Sbjct 194463 TTCTTGCTGGGGCGGTTGT---TCAGGTGCGAGAAGAGCAGGCA-GGCAAAGTCGGTGTG 194408 Query 74765 CGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACG 74824 | |||||| || | |||| || || ||||| | || || ||||| || ||||| Sbjct 194407 CAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCACG 194348 Query 74825 CTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGC 74884 ||| || ||| || |||| |||| || |||||||||||| ||||| || Sbjct 194347 CTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCGGC 194288 Query 74885 AAAGGCGACAAGGCGTTGCGCGAACGGT------GC-ATCGGAAGTCATCCAAGTCTGAG 74937 |||||| || || || || || || ||| || ||||||| ||||| | | | Sbjct 194287 AAAGGCCACCAGACGCTGGGC-AAAGGTCGACTCGCGATCGGAA---ATCCACTTGAGGG 194232 Query 74938 CCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGGCTTGCC 74996 |||| || || || || || |||||| | || ||||| || | ||| ||| | | Sbjct 194231 CCCAGTCGGCCTTGCGGCGGA-TGCAGGGAATGGTGTCGATGGCGTTGAACAGG--TAGC 194175 Query 74997 TTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAA 75054 | | || | || ||||||| | | |||| || | || |||||||||||||| || | Sbjct 194174 TGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGA 194115 Query 75055 TCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCT 75114 | ||| | | |||| | ||||||| | || ||||| | ||||| || || Sbjct 194114 TGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGC 194055 Query 75115 TTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174 || ||| | | | ||||| |||| |||||||||||||| || ||||| |||| Sbjct 194054 CCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCA 193995 Query 75175 GTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCAATCCTTCAGGT 75231 | || ||| || | |||||| || || | |||| ||| || | || | Sbjct 193994 GGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGAT 193935 Query 75232 CCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 || | || ||||||||||||| ||||||||||| | | ||||| ||||||| Sbjct 193934 CCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACA 193878 >seq497 Length=124647 Score = 104 bits (114), Expect = 3e-17 Identities = 284/428 (66%), Gaps = 14/428 (3%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| || || || |||||||| ||||||| ||| || | ||| || ||||||| | Sbjct 63680 CCCGTACCAATACCATCGGCACCGTTAACCAGAACCATGGGGATAATGGGAGCGTAAACC 63621 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAA-CGGAATTGTCAGCCGG 151994 ||||| | | | || || || | || | || || ||| ||| || | Sbjct 63620 GTGGGCTCAATTTTCTTGCCATCCTCGTACTGGTCCTCCAGAATCGGC----TCATCCAG 63565 Query 151995 ATCG---AATATCCGTCGAGTCATAGGACT-CAAACGCGTGAAGATGTATCGGGAGCTG- 152049 || || | || || | || ||| | || ||||||| ||| || || ||||| Sbjct 63564 CACGCTAAACACACGGCGTG-CAAAGGGCGACAGACGCGTGTGGATATAACG--AGCTGA 63508 Query 152050 -GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTT 152108 || |||||| ||||| ||||| || | |||||| | || |||||| || ||| Sbjct 63507 GGCAGCATCCGAACCACCAGCCAGACGAGATCCAAAGTTACCGCTGGGCTCCAGACAGTT 63448 Query 152109 GAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGC 152168 || |||||||| || || || ||||| |||| | | || || |||||| ||| Sbjct 63447 GACGTTGTTGGAACCAACAAAGTTCTGCGCCAGACCAATGATGGTCTGCTGCAGCGACGC 63388 Query 152169 TTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCAT 152228 |||||||| || || ||||| | | | | || || || | || |||||||||| Sbjct 63387 CTCACCGTGCTGGTAGGCCGTGCGACCAGAAACATAACCGGCAAGCTCAACCACCTTCAT 63328 Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAA 152288 ||| | | ||| || ||| ||||||||||| |||||||||||| || || || Sbjct 63327 ATCCTTGACAATGTTGCTCATGAAGCAGGCGTAAATGACCTTGCGCTGGCCGGGCTTGAA 63268 Query 152289 ACCGTCCA 152296 || |||| Sbjct 63267 GCCATCCA 63260 Score = 100 bits (110), Expect = 3e-16 Identities = 172/248 (69%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 117326 GCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTC 117385 ||||||||| |||||||| ||||| | || || | || || ||||||| ||| Sbjct 63506 GCAGCATCCGAACCACCAGCCAGACGAGATCCAAAGTTACCGCTGGGCTCCAGACAGTTG 63447 Query 117386 AGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCC 117445 | |||||||| || |||||||| || |||| | || || || || |||| Sbjct 63446 ACGTTGTTGGAACCAACAAAGTTCTGCGCCAGACCAATGATGGTCTGCTGCAGCGACGCC 63387 Query 117446 TCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATG 117505 ||||| || || || ||||| | | | || || || || |||| | |||||||||| Sbjct 63386 TCACCGTGCTGGTAGGCCGTGCGACCAGAAACATAACCGGCAAGCTCAACCACCTTCATA 63327 Query 117506 TC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 || |||| | ||| || ||| |||||| ||||| ||||||||||| | ||||| | Sbjct 63326 TCCTTGACA--ATGTTGCTCATGAAGCAGGCGTAAATGACCTTGCGCTGGCCGGGCTTGA 63269 Query 117564 GACCATCC 117571 |||||| Sbjct 63268 AGCCATCC 63261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212299451800