Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq21 293 3e-74
seq90 147 2e-30
seq497 104 3e-17
>seq21
Length=78807
Score = 293 bits (324), Expect = 3e-74
Identities = 508/726 (70%), Gaps = 18/726 (2%)
Strand=Plus/Plus
Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290
||||| |||||||||| || | ||| ||| |||| ||| || |||||| ||||
Sbjct 60870 CGTGTTATTGAGACGTACAACCTCATGTCGAGC---AAGTTCTTCACCCACGCCTCGCCC 60926
Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350
|| |||||||||||||||||| || | ||| |||| ||||||||||| | |||
Sbjct 60927 ACTCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCATCTTGCTTCCTGGTTGACATG 60986
Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410
||||| ||||||||||| ||||| ||||| || |||||| ||||| |||||||||
Sbjct 60987 AAGGAAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAG 61046
Query 53411 TGGTCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCA 53468
| | ||||||||||| || | || || | || ||||||| | ||| | ||
Sbjct 61047 ATGGCCGGTGGTATCGGACTCAA-TG-TCCATCGCATCCGTGCCACTGGCTCGTACATTG 61104
Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528
|| || ||||| | || | || ||| | || ||||| || || ||||||||||| |
Sbjct 61105 CCGGCACCAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTG 61164
Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588
|||| |||||| | ||||| || |||||| || | || ||||| ||||| ||||
Sbjct 61165 CCCGCTACGTCGATCAGGGCGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGC 61224
Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648
|||||||||| || | | || || || || ||||| ||| || || | || |||
Sbjct 61225 CGTGGCACGCGGATGTGTTTGACTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGG 61284
Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708
| ||| ||||||||| || || |||||||| || |||||||||||| | || |
Sbjct 61285 TCCGCGCCCGTGACCTTTTCCTGGCGCTGTGGATCCCTGACCTCTTCATGAAGCGTGTTG 61344
Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTC 53767
||||| || ||| ||| ||||||||||| ||||||||||| ||||| | | || |
Sbjct 61345 AGAAGAACTCGGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTG-C 61403
Query 53768 TACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGA 53825
||||| ||||||||| | | |||| | |||| |||| ||||||| |
Sbjct 61404 TACGGCGAGGAGTTTGAGGCTCTGTACGAAAGGTACGAGCAG--GAGGGCCGTGGCCGCG 61461
Query 53826 AGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAA 53885
| | ||||||| | || ||||| | || || || || ||| |||||||| |
Sbjct 61462 CGTCGATCAAGGCCCAGAAGCTATGGTACGCCATTCTGGAGGCTCAGACCGAGACGGGCA 61521
Query 53886 CGCCGTACATGTGCTACAAGGA-TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|||| ||| |||||||| | || ||| |||||||||||||||||| | |||
Sbjct 61522 ACCCGTTTATGCTGTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCTGGGC 61580
Query 53945 GTCATC 53950
||||
Sbjct 61581 ACCATC 61586
Score = 118 bits (130), Expect = 1e-21
Identities = 147/198 (74%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785
|||||| | | ||| ||| |||||||||||| | || | | || || | | |||
Sbjct 62347 TCAAGGCGCTGTACAAGACTGTGTGGGAGATTTCGCAACGTACGGT-TG-TGCAGATGGC 62404
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|||||| |||||||| | ||||||||||| ||||| || |||||| |||| || | ||
Sbjct 62405 TGCTGACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATCCACATGAAGGACCC 62464
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| | ||| |||| | | | ||||||||| ||| |||||| ||| |||||||||||
Sbjct 62465 TACTATGGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGG 62524
Query 55906 TATGTACTATCTGCGGAC 55923
|||||||| ||||| ||
Sbjct 62525 CATGTACTACCTGCGTAC 62542
Score = 89.7 bits (98), Expect = 6e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| | ||||| ||||| || || ||| | ||||| ||||||||
Sbjct 62100 CGCAACTCGCTGCTGCTTGCGCCCATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAAC 62159
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||||||||| |||||||||||| ||| || || || || |||
Sbjct 62160 AACGAGTGCTTCGAGCCGTACACTTCCAACATCTACCAGCGTCGTGTGCTGGCTGGCGAG 62219
Query 55604 TT 55605
||
Sbjct 62220 TT 62221
>seq90
Length=200924
Score = 147 bits (162), Expect = 2e-30
Identities = 544/837 (65%), Gaps = 34/837 (4%)
Strand=Plus/Minus
Query 74472 ACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGAAA 74531
|| ||||| ||||| ||||||||||| || ||| ||||||||||||||| |||| ||
Sbjct 194700 ACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATGAAGTCAAAG 194641
Query 74532 GGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAGGCGATCCGCC 74588
|||||| | | | ||| | ||| || || | ||| || || || ||
Sbjct 194640 GGGTTCGTGGAGCGGTAGAC---CTTGTCGTTGCCGAGGGCAACCAGCAGACGGTCGGCG 194584
Query 74589 ACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCACGGCAGT 74648
||||| | |||||||||| |||| | || | |||||||| || ||| |||||
Sbjct 194583 ACAAACTCAATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGCAGGGCGCAGGGCAGG 194524
Query 74649 GCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGAATGT-C 74707
|||||||| | || || | || | || || || || | | || | |
Sbjct 194523 GCCTCGGTCAGGAATTCCTTTTCAATGACGACGGCGTCGGTGATGATTTCCTCAACGAGC 194464
Query 74708 TT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCTGATG 74764
|| || |||| || | ||||||| ||| | ||| | || |||||| || ||
Sbjct 194463 TTCTTGCTGGGGCGGTTGT---TCAGGTGCGAGAAGAGCAGGCA-GGCAAAGTCGGTGTG 194408
Query 74765 CGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACG 74824
| |||||| || | |||| || || ||||| | || || ||||| || |||||
Sbjct 194407 CAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCACG 194348
Query 74825 CTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGC 74884
||| || ||| || |||| |||| || |||||||||||| ||||| ||
Sbjct 194347 CTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCGGC 194288
Query 74885 AAAGGCGACAAGGCGTTGCGCGAACGGT------GC-ATCGGAAGTCATCCAAGTCTGAG 74937
|||||| || || || || || || ||| || ||||||| ||||| | | |
Sbjct 194287 AAAGGCCACCAGACGCTGGGC-AAAGGTCGACTCGCGATCGGAA---ATCCACTTGAGGG 194232
Query 74938 CCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGGCTTGCC 74996
|||| || || || || || |||||| | || ||||| || | ||| ||| | |
Sbjct 194231 CCCAGTCGGCCTTGCGGCGGA-TGCAGGGAATGGTGTCGATGGCGTTGAACAGG--TAGC 194175
Query 74997 TTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAA 75054
| | || | || ||||||| | | |||| || | || |||||||||||||| || |
Sbjct 194174 TGCGCTGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGA 194115
Query 75055 TCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCT 75114
| ||| | | |||| | ||||||| | || ||||| | ||||| || ||
Sbjct 194114 TGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGC 194055
Query 75115 TTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCA 75174
|| ||| | | | ||||| |||| |||||||||||||| || ||||| ||||
Sbjct 194054 CCGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCA 193995
Query 75175 GTACCATTTTGATAAAGTGGCGCTCATC---GTCAGTGAGTTTGTCCCAATCCTTCAGGT 75231
| || ||| || | |||||| || || | |||| ||| || | || |
Sbjct 193994 GGACGTGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGAT 193935
Query 75232 CCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288
|| | || ||||||||||||| ||||||||||| | | ||||| |||||||
Sbjct 193934 CCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACA 193878
>seq497
Length=124647
Score = 104 bits (114), Expect = 3e-17
Identities = 284/428 (66%), Gaps = 14/428 (3%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| ||||| || || || |||||||| ||||||| ||| || | ||| || ||||||| |
Sbjct 63680 CCCGTACCAATACCATCGGCACCGTTAACCAGAACCATGGGGATAATGGGAGCGTAAACC 63621
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAA-CGGAATTGTCAGCCGG 151994
||||| | | | || || || | || | || || ||| ||| || |
Sbjct 63620 GTGGGCTCAATTTTCTTGCCATCCTCGTACTGGTCCTCCAGAATCGGC----TCATCCAG 63565
Query 151995 ATCG---AATATCCGTCGAGTCATAGGACT-CAAACGCGTGAAGATGTATCGGGAGCTG- 152049
|| || | || || | || ||| | || ||||||| ||| || || |||||
Sbjct 63564 CACGCTAAACACACGGCGTG-CAAAGGGCGACAGACGCGTGTGGATATAACG--AGCTGA 63508
Query 152050 -GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTT 152108
|| |||||| ||||| ||||| || | |||||| | || |||||| || |||
Sbjct 63507 GGCAGCATCCGAACCACCAGCCAGACGAGATCCAAAGTTACCGCTGGGCTCCAGACAGTT 63448
Query 152109 GAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGC 152168
|| |||||||| || || || ||||| |||| | | || || |||||| |||
Sbjct 63447 GACGTTGTTGGAACCAACAAAGTTCTGCGCCAGACCAATGATGGTCTGCTGCAGCGACGC 63388
Query 152169 TTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCAT 152228
|||||||| || || ||||| | | | | || || || | || ||||||||||
Sbjct 63387 CTCACCGTGCTGGTAGGCCGTGCGACCAGAAACATAACCGGCAAGCTCAACCACCTTCAT 63328
Query 152229 GTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAA 152288
||| | | ||| || ||| ||||||||||| |||||||||||| || || ||
Sbjct 63327 ATCCTTGACAATGTTGCTCATGAAGCAGGCGTAAATGACCTTGCGCTGGCCGGGCTTGAA 63268
Query 152289 ACCGTCCA 152296
|| ||||
Sbjct 63267 GCCATCCA 63260
Score = 100 bits (110), Expect = 3e-16
Identities = 172/248 (69%), Gaps = 4/248 (2%)
Strand=Plus/Minus
Query 117326 GCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTC 117385
||||||||| |||||||| ||||| | || || | || || ||||||| |||
Sbjct 63506 GCAGCATCCGAACCACCAGCCAGACGAGATCCAAAGTTACCGCTGGGCTCCAGACAGTTG 63447
Query 117386 AGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCC 117445
| |||||||| || |||||||| || |||| | || || || || ||||
Sbjct 63446 ACGTTGTTGGAACCAACAAAGTTCTGCGCCAGACCAATGATGGTCTGCTGCAGCGACGCC 63387
Query 117446 TCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATG 117505
||||| || || || ||||| | | | || || || || |||| | ||||||||||
Sbjct 63386 TCACCGTGCTGGTAGGCCGTGCGACCAGAAACATAACCGGCAAGCTCAACCACCTTCATA 63327
Query 117506 TC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563
|| |||| | ||| || ||| |||||| ||||| ||||||||||| | ||||| |
Sbjct 63326 TCCTTGACA--ATGTTGCTCATGAAGCAGGCGTAAATGACCTTGCGCTGGCCGGGCTTGA 63269
Query 117564 GACCATCC 117571
||||||
Sbjct 63268 AGCCATCC 63261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212299451800
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