Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq13 100 2e-16
>seq13
Length=236849
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||| |||| || || || |||||| || ||||| || || ||
Sbjct 135354 GCCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 135413
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||||| || | || || || || ||||| ||||| || | |||||| |||||||| ||
Sbjct 135414 CAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 135473
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | || ||||| | |||||
Sbjct 135474 AATGCCCTCCTTGTCCTGGATC-TTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCA 135532
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| || || || || ||||| | || || ||||| ||||||||
Sbjct 135533 CCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| ||||| || ||||| |||||| || ||||| || || || || || ||
Sbjct 135592 AGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGA 135651
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||| || || || || || || | |||||| |||||||| || | ||||||
Sbjct 135652 CCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCC 135711
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || || | || ||||| | |||||| |||| ||
Sbjct 135712 TTGTCCTGGATC-TTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGT 135770
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || || ||||| ||||||||
Sbjct 135771 GATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| ||||| || ||||| |||||| || ||||| || || || || || ||
Sbjct 135820 AGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGA 135879
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||| || || || || || || |||||||| |||||||| || | ||||||
Sbjct 135880 CCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGAATGCCCTCC 135939
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 135940 TTGTCCTGGATCTT 135953
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||| | |||||||| |||||| || ||||| || || || ||||| ||
Sbjct 136104 AGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGG 136163
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| ||||| || | ||||| |||||||| || | ||||||
Sbjct 136164 CCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCC 136223
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 136224 TTGTCCTGGATCTT 136237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727524850053
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |