Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq180 98.7 9e-16
>seq180
Length=32333
Score = 98.7 bits (108), Expect = 9e-16
Identities = 190/274 (69%), Gaps = 6/274 (2%)
Strand=Plus/Plus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
|||| ||||| || ||||||||| | |||| ||| |||||||| | ||| | ||
Sbjct 9242 TGTGACACGGTGGCAGCGCCATCTTCTTCAAATCCGCCGGATTCCACGCACTCATGATGA 9301
Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866
| | || || | || | ||||| ||| | ||| | | |||||| || | |
Sbjct 9302 TGCGTCGATCGTACGGAGTATTCTTCAGCTTGTGCACCACCTCCGCCAGCTGATCGACGC 9361
Query 6867 CCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925
|||| |||| ||||||| || ||| | | |||||| || ||||| || | |||||||
Sbjct 9362 CCTGACCCGTGTAGTCCGTCTGCGCATCGAC-ATACTCTGCGCCAAAATGCCGCCACTGG 9420
Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA--CCCCCGCTTGTCCA 6983
|||||||| || |||||||| |||||||| |||| | | | ||| ||| |||| |
Sbjct 9421 AACCCGTACACGGGGCCCAAATCGCCCTCAGCCCG-GTGGCCCAGGCCCACGC-TGTCGA 9478
Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| | | || ||||| | |||||||||||||
Sbjct 9479 GGTACGCGCGCGACCCATTGCCGTCCCAGATCTT 9512
Score = 98.7 bits (108), Expect = 9e-16
Identities = 190/274 (69%), Gaps = 6/274 (2%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG--TTCCCATCTC 34385
||||||||||||| | ||||| || | | || |||| ||| ||| | | | |
Sbjct 9512 AAGATCTGGGACGGCAATGGGTCGCGCGCGTACCTCGACA-GCGTGGGCCTGGGCCAC-C 9455
Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
||| |||||||| |||||||| || ||||||||||||||| | || ||||| || ||||
Sbjct 9454 GGGCTGAGGGCGATTTGGGCCCCGTGTACGGGTTCCAGTGGCGGCATTTTGGCGCAGAGT 9395
Query 34446 ATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATC 34504
|| | | ||| || ||||||| |||| ||||| | || |||||| | | ||| |
Sbjct 9394 AT-GTCGATGCGCAGACGGACTACACGGGTCAGGGCGTCGATCAGCTGGCGGAGGTGGTG 9336
Query 34505 GACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAG 34564
||| ||||| | || | || || | ||| | ||| | |||||||| ||| |
Sbjct 9335 CACAAGCTGAAGAATACTCCGTACGATCGACGCATCATCATGAGTGCGTGGAATCCGGCG 9276
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598
||| | ||||||||| || ||||| ||||
Sbjct 9275 GATTTGAAGAAGATGGCGCTGCCACCGTGTCACA 9242
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|| |||||| | ||||||| || ||||| || |||| ||| | | | ||| |||| |
Sbjct 8893 ATCTTGAGCAGCGGGAACGCGCGCGGCTCGCGCTGCACCTGCACCTGCAGCGCGTCGACG 8952
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACC 6611
|||| ||| | ||||| || |||| |||| || ||| || || || |
Sbjct 8953 TGGTCGGCGTACACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCGGGTACGAGAT 9010
Query 6612 CCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCC 6671
| | || | |||| ||||| ||||||||| | ||| ||||||||||| ||||| |
Sbjct 9011 CGGTGGCACGCGCGAGCATGTGCGTGAGCAGCGAGTACGAGGCAATGTTGAAGGGCACGC 9070
Query 6672 CTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
| | |||||||| | ||| || || ||||| ||||||
Sbjct 9071 CGAGGCCCATGTCGCACGAGCGCTGGTAGAGTTGGCAG 9108
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||| ||||| || || ||| | |||||||| | || ||||| |||||||||||
Sbjct 9108 CTGCCAACTCTACCAGCGCTCGTGCGACATGGGCCTCGGCGTGCCCTTCAACATTGCCTC 9049
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||| | ||||||||| ||||| |||| | || | | | || || || |||
Sbjct 9048 GTACTCGCTGCTCACGCACATGCTCGCGCGTGCCACCGATCTCGTACCCGGCAGCCTGAC 8989
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
|| |||| |||| || ||||| | ||| ||||| |||| ||| | | | |||
Sbjct 8988 GC--ACGTCATGGGCGACGCGCACGTGTACGCCGACCACGTCGACGCGCTGCAGGTGCAG 8931
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAAT 34851
|||| || ||||| || ||||||| | |||||| ||
Sbjct 8930 GTGCAGCGCGAGCCGCGCGCGTTCCCGCTGCTCAAGAT 8893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448259368625520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |