Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq90 91.5 2e-13
>seq90
Length=200924
Score = 91.5 bits (100), Expect = 2e-13
Identities = 346/542 (64%), Gaps = 6/542 (1%)
Strand=Plus/Minus
Query 46645 TGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCA 46704
|| |||||||| || | ||| | ||||| ||||| || || || ||||| || |||
Sbjct 194409 TGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCA 194350
Query 46705 CGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCC 46764
||||| ||||| || || | || || | || || ||||| ||||| || || ||
Sbjct 194349 CGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCG 194290
Query 46765 GCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTTGAGCC 46821
|| || || || || | || | | | | || || ||||||| | | |||
Sbjct 194289 GCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGATCGGAAATCCACTTGAGGGCC 194230
Query 46822 CAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttt 46881
|| || ||||| | || || || || || || || || || || || |
Sbjct 194229 CAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAGGTAGCTGCGC 194170
Query 46882 tCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTT 46941
| || || || | || || || || | || ||| | || || || |||||
Sbjct 194169 TGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTC 194110
Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001
|| || ||||| || ||||| || || | || || | ||||| ||||| |
Sbjct 194109 TCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAG 194050
Query 47002 AATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACA 47061
|| || ||| || ||||| || || || || || ||||||||||| |||| ||
Sbjct 194049 AAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACG 193990
Query 47062 TGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTT 47118
|| || ||||| || ||||| | ||| | || |||||||| | || ||| ||
Sbjct 193989 TGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTG 193930
Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCAT 47178
|| | ||| | || || || |||||||| |||||||| || || || ||||| | |||
Sbjct 193929 GACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAG 193870
Query 47179 AT 47180
||
Sbjct 193869 AT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929578781120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |