Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq90 91.5 2e-13 >seq90 Length=200924 Score = 91.5 bits (100), Expect = 2e-13 Identities = 346/542 (64%), Gaps = 6/542 (1%) Strand=Plus/Minus Query 46645 TGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCA 46704 || |||||||| || | ||| | ||||| ||||| || || || ||||| || ||| Sbjct 194409 TGCAGGCCTTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACCA 194350 Query 46705 CGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCC 46764 ||||| ||||| || || | || || | || || ||||| ||||| || || || Sbjct 194349 CGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCCGAGAAGAAGATGCCCTCGACGGCG 194290 Query 46765 GCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTTGAGCC 46821 || || || || || | || | | | | || || ||||||| | | ||| Sbjct 194289 GCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGATCGGAAATCCACTTGAGGGCC 194230 Query 46822 CAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttt 46881 || || ||||| | || || || || || || || || || || || | Sbjct 194229 CAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTGAACAGGTAGCTGCGC 194170 Query 46882 tCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTT 46941 | || || || | || || || || | || ||| | || || || ||||| Sbjct 194169 TGGGCAGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGTTC 194110 Query 46942 TCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAA 47001 || || ||||| || ||||| || || | || || | ||||| ||||| | Sbjct 194109 TCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGAG 194050 Query 47002 AATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACA 47061 || || ||| || ||||| || || || || || ||||||||||| |||| || Sbjct 194049 AAACGCTCAACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCAAAAAAGGCCAGGACG 193990 Query 47062 TGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTT 47118 || || ||||| || ||||| | ||| | || |||||||| | || ||| || Sbjct 193989 TGCGAGATGAAATACTTCTCATCCTTGTTCATGCGGTTGTTCCAGTCGTGGAGATCCTTG 193930 Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCAT 47178 || | ||| | || || || |||||||| |||||||| || || || ||||| | ||| Sbjct 193929 GACAGATCAATCTCCTCGGCCGTCCAGAAAGACGCCTCGGCCTTCTTGTACATCTGCCAG 193870 Query 47179 AT 47180 || Sbjct 193869 AT 193868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929578781120