Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq13 113 1e-19
seq88 93.3 1e-13
>seq13
Length=236849
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || ||||||||||| || ||||||||||| || | | || | ||||||
Sbjct 135598 AGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCT 135657
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || || | ||||||||||| | || || ||||| ||
Sbjct 135658 TCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 135717
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| || ||| || || ||||| || ||
Sbjct 135718 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTC 135777
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 135778 TTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || ||||| || ||||||||||| |||| | || | |||||
Sbjct 135370 AGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCC 135429
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||||||||||| | || || ||||| ||
Sbjct 135430 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 135489
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| || ||| || || ||||| || ||
Sbjct 135490 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTC 135549
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| || |||| ||||||
Sbjct 135550 TTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || ||||||||||| || ||||||||||| |||| | || | |||||
Sbjct 136110 AGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGGCCATCC 136169
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | ||||||||||| | ||| || ||||| ||
Sbjct 136170 TCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC 136229
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | |||| ||| || || ||||| || || ||
Sbjct 136230 TGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTCCACCTCAAGGGTGATGGTC 136289
Query 152073 TTGCCCGT 152080
||||||||
Sbjct 136290 TTGCCCGT 136297
Score = 89.7 bits (98), Expect = 1e-12
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || ||||||||||| || ||||||||||| || | | || | ||||||
Sbjct 135826 AGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGACCATCT 135885
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || | | ||||||||||| | || || ||||| ||
Sbjct 135886 TCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 135945
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | | | || || ||| ||||| || || || ||
Sbjct 135946 TGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACTTCGAGGGTGATGGTC 136005
Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094
||||| ||||| ||||| ||||
Sbjct 136006 TTGCCGGTGAGGGTCTTGACGA 136027
>seq88
Length=56780
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||| | ||||| || || || || ||||||||
Sbjct 28287 TTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 28228
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | |||||| |||| | || || ||||| || || || || |||||| | ||
Sbjct 28227 AGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 28168
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| || ||| || || || ||||| || || ||||| || ||||| |||||
Sbjct 28167 ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 28108
Query 152097 ACCTGCATTTT 152107
| |||||| ||
Sbjct 28107 ATCTGCATCTT 28097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153812802219011
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