Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq13 138 8e-28
seq88 125 5e-24
>seq13
Length=236849
Score = 138 bits (152), Expect = 8e-28
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||||||| || || |||||| ||||||||||| ||||
Sbjct 135355 CCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 135414
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| ||| | || ||||||||||| || |||||||||| ||||||||| || | ||
Sbjct 135415 AGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 135474
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | |||||||| | ||| ||||
Sbjct 135475 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAGGACTCCA 135532
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || || ||||| || || || ||||| || ||||| |||||
Sbjct 135533 CCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581
Score = 127 bits (140), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||||||||| || || |||||| ||||||||||| ||
Sbjct 135579 CATACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 135638
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || || |||||||| || || || |||| ||||||||| || |
Sbjct 135639 CGAGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGG 135698
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | || ||||| ||| ||||| ||| || ||| | |||||||| | |||
Sbjct 135699 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAGGAC 135756
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| || || ||||| || || || ||||| || ||||| |||||
Sbjct 135757 TCCACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809
Score = 122 bits (134), Expect = 6e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||| ||||| || || |||||| ||||||||||| ||
Sbjct 136091 CATACCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 136150
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||||| |||||||| || |
Sbjct 136151 GGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGG 136210
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | ||| ||||| ||| |||||| ||| | | | || ||||||| |||||
Sbjct 136211 AGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGATTC 136270
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGT 44313
|||||| | || || ||||| |||||
Sbjct 136271 CACCTCAAGGGTGATGGTCTTGCCCGT 136297
Score = 105 bits (116), Expect = 5e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||||||||| || || |||||| ||||||||||| ||
Sbjct 135807 CATACCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTC 135866
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || || |||||||| || || || |||||||||||||| || |
Sbjct 135867 CGAGAGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGG 135926
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||| | | | ||||| || | || ||
Sbjct 135927 AGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTC 135986
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
|| || | || || ||||| || ||||||||||| ||||
Sbjct 135987 GACTTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 136027
>seq88
Length=56780
Score = 125 bits (138), Expect = 5e-24
Identities = 144/192 (75%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || ||| | || ||||||||||| || || ||||
Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||||||||| | || | || ||||| ||| ||||| ||| || |||
Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | ||||||||||| ||||| |||||||| ||
Sbjct 28169 --CGATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGAC 28112
Query 44326 GAAGATTTGCAT 44337
||| || |||||
Sbjct 28111 GAAAATCTGCAT 28100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988026425797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |