Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13]
541 sequences; 28,417,647 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq13 138 3e-27
seq88 132 1e-25
seq131 118 3e-21
>seq13
Length=236849
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || ||||| || |||||||| ||| |||
Sbjct 135806 CAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCGGAC 135747
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || ||||||||||||||
Sbjct 135746 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 135687
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| |||||||| | || || | || || ||| ||
Sbjct 135686 CGTCTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATC 135627
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 135626 CAGAAGGAGTCTACTCTGCACCTGGT 135601
Score = 136 bits (150), Expect = 1e-26
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || ||||| || |||||||| ||| |||
Sbjct 135578 CAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTGGAGGTGGAGTCCTCGGAC 135519
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || || |||||||||||
Sbjct 135518 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 135459
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | || || |||| || ||| ||
Sbjct 135458 CGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATC 135399
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || ||||| || ||| ||
Sbjct 135398 CAGAAGGAGTCGACCCTGCACCTGGTTCTG 135369
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| ||||||||| || ||||| ||||| ||||||||
Sbjct 136297 ACGGGCAAGACCATCACCCTTGAGGTGGAATCTTCCGACACTATCGACAACGTCAAGTCG 136238
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| |||||||| || || ||||||||||||||||| || || ||||| || || ||
Sbjct 136237 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTTGCTGGTAAG 136178
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || || |||| || ||| |||| || || || || || ||
Sbjct 136177 CAGCTGGAGGATGGCCGCACACTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 136118
Query 178125 CTTGT 178129
|||||
Sbjct 136117 CTTGT 136113
Score = 129 bits (142), Expect = 1e-24
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || ||||||||||| || || || || |||||||
Sbjct 136027 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAAGTCGAGTCGTCGGATACCATCG 135968
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| |||||||| || || || |||||||||||||| || | |
Sbjct 135967 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTTTGA 135908
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
| ||||| || || ||||| |||||||| | || || | || || ||| |||| || |
Sbjct 135907 TTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACGCTCTCGGACTACAACATCCAGAAGG 135848
Query 178111 AATCAACACTGCATCTTGT 178129
| || || ||||| || ||
Sbjct 135847 AGTCTACTCTGCACCTGGT 135829
>seq88
Length=56780
Score = 132 bits (146), Expect = 1e-25
Identities = 149/199 (75%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| || |||| | |||||||| || || || || || || ||||| ||||||||||
Sbjct 28092 AGGTCAAGATGC---AGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGG 28148
Query 177970 TGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCC 178029
| || ||| ||||||||||| || ||||| ||||| ||||| || || || || |
Sbjct 28149 TTGAGTCCTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTC 28208
Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089
| ||||| ||||| || || |||||||| || || ||||| || ||||| | |||||
Sbjct 28209 CCCCGGATCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGT 28268
Query 178090 CCGATTATAACGTCCAAAA 178108
|||| || ||| |||| ||
Sbjct 28269 CCGACTACAACATCCAGAA 28287
>seq131
Length=44026
Score = 118 bits (130), Expect = 3e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 177916 AAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAA 177975
|| ||| || | |||||| || || || || || || || || ||||| ||||| ||
Sbjct 31265 AACTGCCGCACAGTTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGT 31324
Query 177976 GCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGG 178035
||| ||||| ||||| |||||||| ||||| |||||||| || || || || ||||
Sbjct 31325 CCTCGGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGG 31384
Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095
||||||| || || ||||| || || || ||||| || ||||| | ||||| |||| |
Sbjct 31385 ACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACT 31444
Query 178096 ATAACGTCCAAAA 178108
| ||| | || ||
Sbjct 31445 ACAACATTCAGAA 31457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203722856261954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |