Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq13 143 2e-29 seq88 140 3e-28 seq131 136 4e-27 >seq13 Length=236849 Score = 143 bits (158), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| ||||| || ||||||||| ||||| |||||||| Sbjct 135354 GCCGCCACGCAGACGCAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 135413 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||| || || || ||||| ||||| ||||||| ||| Sbjct 135414 CAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 135473 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || || |||||||||| ||| || ||| || | ||| ||||| |||||| Sbjct 135474 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATG--GTGTCCGAGGACTCC 135531 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| || || |||||||| Sbjct 135532 ACCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135581 Score = 141 bits (156), Expect = 9e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 135583 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135642 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| ||||| ||||| ||||||| ||| Sbjct 135643 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGAGGA 135702 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||||| Sbjct 135703 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAGGACTCCA 135760 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| || || |||||||| Sbjct 135761 CCTCCAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 135809 Score = 116 bits (128), Expect = 3e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 135811 CCACCACGGAGGCGCAGCACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 135870 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| |||| ||||| ||||||| ||| Sbjct 135871 AGCGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCCGGAGGA 135930 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | || || |||||| || Sbjct 135931 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTATCCGACGACTCGAC 135989 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 || | || || || || || || || ||||| |||| Sbjct 135990 TTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 136027 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||||||||| ||||| |||||||| Sbjct 136095 CCACCACGGAGACGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 136154 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| || || || ||||||||||| ||||||| || Sbjct 136155 AGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 136214 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||||| || ||||| Sbjct 136215 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATAGTGTCGGAAGATTCCAC 136273 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || ||||||| Sbjct 136274 CTCAAGGGTGATGGTCTTGCCCGTCA 136299 >seq88 Length=56780 Score = 140 bits (154), Expect = 3e-28 Identities = 149/195 (76%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| || ||||| | || || ||||||||||| ||||| | Sbjct 28289 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 28230 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| || |||| ||||| || |||||| ||| ||| || ||| || | Sbjct 28229 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 28170 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || ||||| |||||||| || ||||| || Sbjct 28169 CG--ATGGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGAC 28112 Query 41851 GAAAATCTGCATGTT 41865 |||||||||||| || Sbjct 28111 GAAAATCTGCATCTT 28097 >seq131 Length=44026 Score = 136 bits (150), Expect = 4e-27 Identities = 145/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| |||||||| || ||||| | || || ||||||||||| || || | Sbjct 31459 CCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 31400 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||||| ||||| || |||||||||| ||| || ||| ||| | Sbjct 31399 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTG 31341 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||||| || || || ||||||||||| ||||| ||| Sbjct 31340 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 31281 Query 41852 AAAATCTGC 41860 ||| | ||| Sbjct 31280 AAACTGTGC 31272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300873669200