Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq18 138 2e-27
>seq18
Length=597235
Score = 138 bits (152), Expect = 2e-27
Identities = 276/405 (68%), Gaps = 8/405 (2%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
|||| || |||||||| || ||| ||||||| ||||| | || |||||| | |
Sbjct 244459 CCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGA 244400
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355
| ||||||||||| || || || | | || | | || | | || || || |
Sbjct 244399 TTTCGCGCGACGAGGGCCTGCA-CACCGACTTTGCCTGCCTGCTCTTCTC---GCACCTG 244344
Query 230356 AACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAACGAA 230412
||||| | || | ||| | ||| | ||||||| || || || || | | ||
Sbjct 244343 AACAACCGCCCCAGCAAGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAG 244284
Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATG 230472
||||||||| | ||| || | || || ||| | ||||||||||| || || |||
Sbjct 244283 AAGGAGTTCCTGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATG 244224
Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532
|||||||| || || || |||||||| | | || || || || |||| || ||
Sbjct 244223 AAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTGGCCCTCGGCAACGAAAAGGTC 244164
Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592
||| ||| | ||||||||||| ||||||||| ||| ||||| || |||||||||
Sbjct 244163 TACCGCTCCACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAAC 244104
Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||| || |||||||| | ||||| |||| | | |||||| ||
Sbjct 244103 TTCTTTGAGAAGCGTGTTGGCGACTACCAGAAGGCCGGTGTGCTG 244059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822969943880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |