Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 1e-33
>seq3
Length=1108403
Score = 158 bits (174), Expect = 1e-33
Identities = 296/426 (69%), Gaps = 12/426 (3%)
Strand=Plus/Minus
Query 145849 CAGGAGAGCTCCCCGCC----CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCA 145903
|||| | ||| ||||| || |||||| ||||| ||| | | ||| || |||||||
Sbjct 700390 CAGGCGCGCTGCCCGCGGATACGACACGTAAAACTGCGCAAAC-ATGTGACACGGCGGCA 700332
Query 145904 GGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA-GCCTCCTGCTCTCG 145962
| ||||| |||||| ||||||||||| ||| | | || || || || | ||
Sbjct 700331 GCGCCATCTTCTTCAGGTCTGCCGGGTTCCACGCGCTCATGATGATGCGTCGGTCGTACG 700272
Query 145963 GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAA 146022
| || |||| | || | || |||| |||||||| |||||||| || |||
Sbjct 700271 GCGTGT-TCTTCAGCTTGTGCACCACGTCCGCCAGCTGGTCGACGCCCTGGCCTGTGTAG 700213
Query 146023 TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGC 146082
|| |||| | || || ||| |||| ||||| || | ||||||||| ||||| |||||
Sbjct 700212 TCGGTCTGCGCATCGACATACTCGGCGCCGAAATGGCGCCACTGGAAGCCGTACACGGGG 700153
Query 146083 CCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCG 146142
|||||||| || | | ||| ||||| ||| | | | ||||| | | || ||||||
Sbjct 700152 CCCAGGTCGCCCTCGGCGCGGTGGCCCAGGCCGACGCTGTCGAGGTACGCGCGCGACCCG 700093
Query 146143 TTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCC 146200
||| ||||||||||||||| ||| |||||| ||| | || || |||| |||
Sbjct 700092 TTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAGCG-GCA-GCGACGACGTGCTGCCCT 700035
Query 146201 TGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260
|||||||| |||||||| | | ||| ||| | ||| || | ||| || |||||||
Sbjct 700034 CAATGAACCACAGCAGCTCGGCAATCACCGCCCGCGTGAACACGCGCTTCGTCGTCAGCA 699975
Query 146261 GGGGGA 146266
| ||||
Sbjct 699974 GCGGGA 699969
Score = 120 bits (132), Expect = 4e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|| ||| | || ||| | || ||||||| | ||| ||||||||||| |||| ||||||
Sbjct 700660 CACCTGCACCTGCAGCGCGTCGACGTGGTCGGCGTACACGTGCGCGTCGCCCATGACGTG 700601
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
| | | |||||| ||||| | | | | |||| ||||| || ||||| |||||
Sbjct 700600 CGTCAGGCTGCCGGGCACGAGGTCGGCCGCGCGCGCGAGCATGTGCGTGAGCAGCGAGTA 700541
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
|| |||||||||||||| || || |||||||| | |||||||||||| ||||||||
Sbjct 700540 CGACGCAATGTTGAAGGGCACGCCGAGGCCCATGTCGCACGAGCGCTGGTAGAGCTGGCA 700481
Query 145851 G 145851
|
Sbjct 700480 G 700480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076239427040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |