Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq53 435 3e-117
seq18 259 4e-64
seq15 100 3e-16
seq5 89.7 5e-13
>seq53
Length=159929
Score = 435 bits (482), Expect = 3e-117
Identities = 1244/1892 (66%), Gaps = 46/1892 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| |||||| || ||||| |||| || || | | || || || || ||||||||
Sbjct 97736 CTGGTCCACAGTGAACTGGATGGGCGCAGCAGCAGCCTGCGTACGCAGGTAGTACATGCC 97795
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT--CCATAACTC 22222
|||||| ||||||| |||||| | ||| || || || ||| || |||| |
Sbjct 97796 CGTCTTGAGACCCAGCTTCCAGCCCGCAAAGTGCATGCTGGT-AATCTTGCCCATGG-TA 97853
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | ||||| | |||| |||||| ||| || || |||||||| || |||||
Sbjct 97854 GGGTCCTTCATGTGGATGTTGAGCGACTGCGACTGGTCAATGAACGCTCCGCGGTCGGCA 97913
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| | | | || ||| ||| || ||||| || ||||||||||| | ||||
Sbjct 97914 GCCATCTGCACAACCGTGCGCTGCGAAATCTCCCACACCGTCTTGTACAGCATCTTGATG 97973
Query 22343 TCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401
|| || || | | || | |||||| |||||||| | ||||| || ||
Sbjct 97974 TCATCGGGGAT-GCTGGGAATGTTCTGGATCGACCCGTTCTCCGCAATGATGCGGTTCTT 98032
Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461
|| |||| ||||| ||| | | | ||| || | ||| |||| || ||
Sbjct 98033 CATGTTATCCGACCACAGACCCAGGTCCACCAAGTCGCGCAGCAGCCACGGGTTGACAAC 98092
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| |||||||| | || || ||||| |||||||||||||| || |||| ||||| |
Sbjct 98093 CTGGAACTCGCCAGCCAGCACACGGCGCTGGTAAATGTTGGAAGTATACGGCTCGAAGCA 98152
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
|| ||||| ||||| ||||| | || || |||||||||||||| | ||| |||||
Sbjct 98153 CTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGCAGCGA 98212
Query 22582 GTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATC 22638
||| | || || |||| |||| | | ||| |||||| | ||||||||| || ||
Sbjct 98213 GTTGCGCACACCATGCTGCTTGA---TCTGCTCCTTGAGCGATGCCCAGTCCCAGAGGTC 98269
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698
| ||||| || || |||||| || | |||| | ||| | | || |||
Sbjct 98270 GCTGGGCGTGACGTT---CCACATGTCAAACTGCAGAATGCCCTGGGAAACAGGCGAGCC 98326
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT-CGCCTCCAACGCGC 22757
|||||||| ||||| || | | |||| || || | |||| || ||
Sbjct 98327 CTCGTACGTAGAGTACGTTCCCTCCTCCTGCGCAATCTC-CATCGACGCCGTCAGAGCAG 98385
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCG---GCGGCGGC-GACGCTTTCG 22813
||| || || ||||| ||||||| | |||| | | | || |||| ||| ||
Sbjct 98386 CGTGGTAGATGGTCTCAAAGATTTGCGTGTTGAGCTTGCGAGCCTCGGCCGAC----TCA 98441
Query 22814 TACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGT 22873
| ||||| || | | || ||| || ||||||| ||||| || || | ||| || ||
Sbjct 98442 AAAGGCATGCGAAGCGCCAAGAAGGCATCCGCCAGGCCCTGGACACCAACACCAATAGGG 98501
Query 22874 CGGTTTTTCAGATTCGACACTTTTGC--CTCGGGCAAAGGATACCAATTCGAATCGATTG 22931
|||| || || | || ||| |||||||| || || || || ||
Sbjct 98502 CGGTGGCGCATGTTG--CTGTTCTGCGCCTCGGGCACGGGGTAGTGGTTGACGTCAATGA 98559
Query 22932 TTCTGTTCAAGTTTCTGGTCACAATT---TTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| | ||||| ||| | ||||| | || || | | |||||||
Sbjct 98560 TGCGGTTCAGGTTGCG---CACAACTACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGT 98616
Query 22989 AAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045
| || | ||||| | |||||| | || | ||| || || ||||| ||||
Sbjct 98617 ACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGG 98676
Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105
| ||||| || | |||||| | ||| || || || || ||| | || |
Sbjct 98677 CAACCTCATCCGGCGCACAGTACTCGATAATCTCCGTGCACAGGTTGGAGCTGCGGATGG 98736
Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165
|||||| || |||||||||| || || ||||| |||||||| |||||| ||||
Sbjct 98737 TGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGT 98796
Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225
|||| |||||| ||||| ||| | || || ||||| |||| || | | ||
Sbjct 98797 TGCCAGTCTCGGTCTGCGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGAT-CGAG 98855
Query 23226 GCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAA 23284
||||| | | ||| || | ||||||||||| ||||| ||| ||||| || | |||||
Sbjct 98856 GCACGACCGCGGCCCTCCTGCTCGTACTTTTCGTACAGCGCCTCAAACTCCTCGCCGTAG 98915
Query 23285 CAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCA 23344
|||||||||||||| || | | | || ||||| ||| |||| | || || ||
Sbjct 98916 CAGTCGGCCAGGCCAGGGCACTCGTTGGGGCACATCAGAGTCCAGTCAGCGTTCTTCTCG 98975
Query 23345 ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACC 23404
|| || |||| || || || || ||||| ||||| ||| || || |||||||| |||
Sbjct 98976 ACACGCTTCATGAACAGGTCAGGGATCCACAGAGCCAGGAAAAGATCACGGGCGCGAACC 99035
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
|| || |||||| |||||| || || | || || ||||| || || |||||||||
Sbjct 99036 TCTTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGC 99095
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| ||||||| |||||| || || || | ||| ||||| ||||| |||||||| |||||
Sbjct 99096 TCCAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCA 99155
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
|||||||| |||| | ||||| || | || |||||||| | ||| ||| ||
Sbjct 99156 GTGTTGTTAAACACACGCAGCATGGGAATGATGCCGTTGGAGGTACCGTTGGTGCCGGCA 99215
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| ||| || | || || | | ||| || | || ||| || || || || ||
Sbjct 99216 ATGTACGAGCCCGTGGCGCGGATGCGGTGGACATTGAGACCGATACCACCCGCCATCTTG 99275
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| ||||| || || || || || ||||| |||||||| || |||||| || |
Sbjct 99276 GAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCCTCAATCGAGTCCTCCTTCATG 99335
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
|||||| ||| || || |||| || || | ||||||| | || |||||| || ||
Sbjct 99336 TCGACCAGGAAGCAAGACGACAGCTGGGCCTGGGGCGTACCAGCGTTGAACAGCGTGGGC 99395
Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA-- 23822
||| || || ||| | ||||||| || |||||||| || ||| || ||| |
Sbjct 99396 GAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGATCGACT 99455
Query 23823 -TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACC 23881
|||| | | | || || | || || ||||| ||||||| || || | ||||||
Sbjct 99456 CTGTCGCCCCAG---ATGCCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACA 99512
Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941
| ||||| | || ||||| || || || | || || || || ||||| || |
Sbjct 99513 ATCTTGCCGTCCAGCTTCAACAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGG 99572
Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
||||| |||||||| |||| ||| ||||| ||
Sbjct 99573 TAGTTGAAGTCACGGTCGTACACAATGGCAGA 99604
>seq18
Length=597235
Score = 259 bits (286), Expect = 4e-64
Identities = 590/877 (67%), Gaps = 23/877 (3%)
Strand=Plus/Minus
Query 57564 CCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTA 57623
||| | || ||| | |||||||| ||||| || || || || ||||| | ||| || |
Sbjct 244925 CCACAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAGGAGATT 244866
Query 57624 GACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGA-GAGAAAT--T 57678
|| ||||| |||||||| ||| ||| | || || || || || || || | |
Sbjct 244865 GATCTGTCCAAGGATCTCCACGACTGGAACAACCGCATGAACAAG--GACGAAAAGTACT 244808
Query 57679 TTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGG 57738
| || ||||| | || || || ||||| || ||||| ||||| |||||||| |||
Sbjct 244807 TCATCTCGCACGTCCTCGCCTTCTTTGCCGCCTCAGATGGCATTGTCAACGAGAACCTGG 244748
Query 57739 TCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAG 57798
| || | || ||| || || || | | ||||| | ||||| ||||| || ||
Sbjct 244747 TTGAGCGCTTCTCAGGCGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGCTTCCAGA 244688
Query 57799 TGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858
| || || ||| | || || || | ||| ||||| |||||||| |||||| | ||||
Sbjct 244687 TCATGATGGAGAACATCCACTCCGAGACGTACTCGCTGCTCATCGACACGTACATCAAGG 244628
Query 57859 ACAACGACGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCA 57915
| || | || || || ||||||||||| ||||| || || ||| ||| |
Sbjct 244627 AGCCCGCCCAG---CGCAGCTACCTGTTCAACGCCATCGACACCATTCCCTGCATCCGCC 244571
Query 57916 AGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCG-CCACGG--CCACGTTCGCCGAGA 57972
||||| || ||| | |||| ||||| || ||||| | || || ||| ||
Sbjct 244570 GCAAGGCCGACTGGGCCCTCAAGTGGATTGC---CGACCACGAGTCGACCTTTGCCCAGC 244514
Query 57973 GGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATAT 58032
| || | || || ||||||||||| || || ||||| || ||| |||||| | || |
Sbjct 244513 GCCTGGTGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCTTTGCCTCCATTT 244454
Query 58033 TTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGC 58092
| ||| || || || || ||||||||||||||||| ||| ||||||| |||| ||||
Sbjct 244453 TCTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCGC 244394
Query 58093 GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC 58152
|||||||||| || || || || ||||| ||||| | | ||| ||| | ||| |
Sbjct 244393 GCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCGCC 244334
Query 58153 CGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212
| | | | | ||| ||| || ||||| || || |||| || || || |||||
Sbjct 244333 CCAGCAAGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCC 244274
Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACA 58272
| || || ||||| || ||| ||||||| |||||| || | ||| ||||||
Sbjct 244273 TGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACA 244214
Query 58273 TTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACAC 58330
|||||||||| |||||| | || || | | || | || | ||| ||| | |
Sbjct 244213 TTGAGTTTGTCGCCGACCGTCTGCTGGTGGCCCTCGGCAACGAAAAGGTC--TACCGCTC 244156
Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGa 58390
| || || ||||| |||||| | |||||||||| |||||||| ||||| || ||
Sbjct 244155 CACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTCTTTGA 244096
Query 58391 aaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427
|| ||| |||| || || || ||| ||| ||
Sbjct 244095 GAAGCGTGTTGGCGACTACCAGAAGGCCGGTGTGCTG 244059
>seq15
Length=634592
Score = 100 bits (110), Expect = 3e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| ||||| || || ||||| ||| |||| ||||| |
Sbjct 108652 AAGATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 108711
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||||||||| ||| | || || ||
Sbjct 108712 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAT 108771
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || ||||||||||| ||| |||| ||
Sbjct 108772 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGA 108809
>seq5
Length=956377
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||| || ||||| || || || | || || || | |||
Sbjct 899859 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATTACTCTGGAGGTGGAGTCATCC 899800
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || || || ||||||||| || | || || ||||||
Sbjct 899799 GACACCATTGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 899740
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| ||| | || ||| | || | || || |||
Sbjct 899739 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCGGACTACAAC 899680
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || |||||||| ||||| ||
Sbjct 899679 ATTCAGAAGGAGTCTACTCTTCACCTGGTTCT 899648
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || || || | || ||||| ||||
Sbjct 899631 ATGCAGATCTTTGTCAAGACGCTGACTGGCAAGACCATTACGCTGGAGGTTGAGTCGTCG 899572
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| | || ||||||||| || | || || ||||||
Sbjct 899571 GATACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAG 899512
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || ||||| || ||| |||| ||| | || | ||| || |||
Sbjct 899511 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTCTCCGACTACAAC 899452
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| || |||| ||
Sbjct 899451 ATCCAGAAGGAGTCGACTCTGCACTTGGTTCT 899420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765976521920
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