Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq53 102 2e-16
>seq53
Length=159929
Score = 102 bits (112), Expect = 2e-16
Identities = 181/259 (70%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || |||||||||| || || ||| || ||||| ||||| |||
Sbjct 99255 CCGATACCACCCGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTATCGTAAATGCCC 99314
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904
||||| || || | | | | | |||||||| || || || |||| || | | ||
Sbjct 99315 TCAATCGAGTCCTCCTTCATGTCGACCAGGAAGCAAGACGACAGCTGGGCCTGGGGC-GT 99373
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| || ||||| ||||| || |||||||| || | | ||||||||||| | ||
Sbjct 99374 ACCAGCGTTGAACAGCGTGGGCGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTA 99433
Query 94965 TGTTTCAATGACAGATTTGATGTCTG-ATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
|| |||||||| | || |||| || ||||| |||||||||||||||||||
Sbjct 99434 CGTCTCAATGACGCGATCGA-CTCTGTCGCCCCAGATGCCAACAGCCACACGCATAATCA 99492
Query 95024 TGTCCTGAGGGCGCTCAAC 95042
||| ||| || ||||| ||
Sbjct 99493 TGTGCTGGGGACGCTCGAC 99511
Score = 93.3 bits (102), Expect = 8e-14
Identities = 112/153 (73%), Gaps = 12/153 (8%)
Strand=Plus/Plus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
||| || || ||||||| ||||| |||||| ||||| | | ||||| |||||||||||
Sbjct 98876 CTCGTACTTTTCGTACAGCGCCTCAAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCA 98935
Query 94467 CTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC------ACTCTCTCCATGAA 94520
||||| |||||||||||| | ||| | |||| ||| || | || ||||||
Sbjct 98936 CTCGTTGGGGCACATCAGAGTCCAGT------CAGCGTTCTTCTCGACACGCTTCATGAA 98989
Query 94521 GAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
|| |||| | ||| | ||| ||||||||||
Sbjct 98990 CAGGTCAGGGATCCACAGAGCCAGGAAAAGATC 99022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583036392580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |