Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 4e-26
>seq3
Length=1108403
Score = 132 bits (146), Expect = 4e-26
Identities = 215/303 (71%), Gaps = 10/303 (3%)
Strand=Plus/Minus
Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168
|||||||||||| | |||| | |||||| || || || |||||| | ||||| || |
Sbjct 700366 CACGTAAAACTG-CGCAAACATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCTGCCG 700308
Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAG---ATCCA 21225
|||||||||||| ||| | |||||| || |||| | || |||| | || | ||
Sbjct 700307 GGTTCCACGCGCTCATGATGATGCGTCGGTCGT---ACGGCGTGTTCTTCAGCTTGTGCA 700251
Query 21226 CCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACT 21285
|||||| ||||||||| || ||||| || ||||| || | || | ||||
Sbjct 700250 CCACGTCCGCCAGCTGGTCGACGCCCTGGCCTGTGTAGTCGGTCTGCGCATCGACATACT 700191
Query 21286 CCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGT 21345
| || || ||||| | ||||||||| |||||||| || ||||| ||||||||| |||||
Sbjct 700190 CGGCGCCGAAATGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGCGCGGT 700131
Query 21346 CCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACG 21404
|| || || ||| | | | | ||||| ||||||| ||||||| || || | |
Sbjct 700130 GGCC-CAGGCCGACGCTGTCGAGGTACGCGCGCGACCCGTTGCCGTCCCAGATCTTGATG 700072
Query 21405 CCG 21407
|||
Sbjct 700071 CCG 700069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775603772480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |