Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq18 129 4e-25
>seq18
Length=597235
Score = 129 bits (142), Expect = 4e-25
Identities = 284/419 (68%), Gaps = 14/419 (3%)
Strand=Plus/Minus
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
|||||||||| || || || ||| || | || || || | ||||| |||| |||||||
Sbjct 244507 TGGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCTTTGCCTCCATTTTCTGGC 244448
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
|| || ||| || ||||| || || | |||||||||||| ||||| || ||||
Sbjct 244447 TGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCGCGCGACG 244388
Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927
| || || ||| |||||||| || |||| || ||| || ||| ||||| |
Sbjct 244387 AGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTG---AAC-AACCGCCCC 244332
Query 22928 AGGACGATGCACAT----CAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTC 22983
|| | || || ||| ||||||| |||||||||| | |||||||| || ||| |
Sbjct 244331 AGCAAGAAGCTCATTGAGGAAATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCCTG 244272
Query 22984 CAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATA 23043
||||| || |||| || || ||||| ||| |||| | ||||||
Sbjct 244271 ACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATT 244212
Query 23044 CAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTT--G 23101
||||||| || || || ||||| | ||||| || | | |||| || || || |
Sbjct 244211 GAGTTTGTCGCCGACCGTCTGCTGGTGGCCCTCGGCAACGAAAAG--GTCTACCGCTCCA 244154
Query 23102 CCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACTTCTTTGA 23159
| || || ||||| || ||||| ||||| | || | | || || || |||||||||||
Sbjct 244153 CGAACCCCTTTGACTTTATGGAGAACATCTCGC-TCGGTGGCAAGACCAACTTCTTTGA 244096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233270038628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |