Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq18 122 1e-22
>seq18
Length=597235
Score = 122 bits (134), Expect = 1e-22
Identities = 364/558 (65%), Gaps = 8/558 (1%)
Strand=Plus/Plus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || || ||| |||||| ||||| || | ||| | ||||||||||| || ||
Sbjct 244363 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGG 244422
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| ||||| || || || ||||| | || || ||||||
Sbjct 244423 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAG 244482
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATGT 42241
|| || || || || |||||||| | || | || || | || | | |||
Sbjct 244483 ATGCCCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGGTCGACTCGTGGTCGGCA 244542
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||||| | ||||| |||||||| | || || || || || ||||| ||
Sbjct 244543 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 244602
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
|| || ||| | | || || | || || ||||| | || ||| |
Sbjct 244603 AACAGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 244662
Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421
|| || || ||||| || || ||||| || |||||||| || | |||||| | | |
Sbjct 244663 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATC 244722
Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481
|| || || | || || ||| | | || ||||| || || || || ||| |||
Sbjct 244723 TGGACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCA 244782
Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCA 42537
|| || || | || || || || || ||||||||| |||| || || |||||
Sbjct 244783 AAGAAGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCC-TTGTTCATGCGGTTGTTCCA 244841
Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597
|| | || ||| || || | ||| | || || ||||||| || || || || |||||
Sbjct 244842 GTCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGACGCCTCGGCCTT 244901
Query 42598 TTTATACATATTCCAGAT 42615
|| ||||| | ||||||
Sbjct 244902 CTTGTACATCTGCCAGAT 244919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138562417760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |