Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq18 239 7e-58
seq53 194 2e-44
>seq18
Length=597235
Score = 239 bits (264), Expect = 7e-58
Identities = 571/851 (67%), Gaps = 37/851 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| ||||| ||||||| ||| ||| | ||||||
Sbjct 244919 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAGGAGATTGATCTG 244860
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGT---TTATA 125135
|||||||| || |||| ||| | | || ||| | | || | ||| | ||
Sbjct 244859 TCCAAGGATCTCCACGACTGGAACAACCGCATGA---ACAAGGACGAAAAGTACTTCATC 244803
Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGAC 125194
|||||| | | ||||||||||||| ||| ||||| || |||||||| || ||| ||||
Sbjct 244802 TCGCACGTCCTCGCCTTCTTTGCCGCCTCAGATGGCATTGTCAACGAGAACCTGGTTGAG 244743
Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCAT 125254
|| ||||| ||| | || || |||| ||||| ||||| ||||| |||||
Sbjct 244742 -CGCTTCTCAGGCGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCAT 244684
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314
||| |||||| | ||||| || | |||||| || || |||| |||||| || ||
Sbjct 244683 GATGGAGAACATCCACTCCGAGACGTACTCGCTGCTCATCGACACGTACATCAAGGAGCC 244624
Query 125315 G---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371
|| || | || || || ||||| |||||||| | || | || || ||
Sbjct 244623 CGCCCAGCGCAGCTACCTGTTC---AACGCCATCGACACCATTCCCTGCATCCGCCGCAA 244567
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
||| | |||| | |||||| | ||| || |||| | | ||| | | |||||
Sbjct 244566 GGCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTCGACCTTTGCCCAGCGCCTGGT 244507
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491
||| || |||||||| |||||||||||||| || || ||||| |||| || |||||
Sbjct 244506 GGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCGCCTTTGCCTCCATTTTCTGGCT 244447
Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551
||||| || || |||||||| ||||| |||||| | || || || |||||
Sbjct 244446 GCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCGCGCGACGA 244387
Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAG--T 125607
|||||| ||| ||||||||| || || || ||||| || | | | ||| ||
Sbjct 244386 GGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCAGCAA 244327
Query 125608 GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667
| || | || || |||| ||||| || |||||||| || || | |
Sbjct 244326 GAAGCT-CATTGAGGAAA---TCATC---------ACTGATGCCGTCGTCATTGAGAAGG 244280
Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727
|||| || || || |||| || | | || | ||||||||| | | || |||
Sbjct 244279 AGTTCCTGACTGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGC 244220
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTT 125784
||||||| |||||||| || || ||||| ||| | | | ||| || ||| | |
Sbjct 244219 AGTACATTGAGTTTGTCGCCGACCGTCTGCTG---GTGGCCCTCGGCAACGAAAAGGTCT 244163
Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844
|| | ||| ||| |||||||| || ||| | ||| || || | || ||||||||||
Sbjct 244162 ACCGCTCCACGAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGTGGCAAGACCAACT 244103
Query 125845 TTTTCGAGAAG 125855
| || ||||||
Sbjct 244102 TCTTTGAGAAG 244092
>seq53
Length=159929
Score = 194 bits (214), Expect = 2e-44
Identities = 353/509 (69%), Gaps = 6/509 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || || | ||| | ||| |||| || |||||||| ||
Sbjct 99139 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCCGAT 99080
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || ||||||| ||| ||| ||||||| || ||| | ||
Sbjct 99079 GTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAGAGGTTCGCGCCCGTGAT 99020
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCT-A 97054
| || || || ||| | || || ||||||||||||| ||| | || | ||| |
Sbjct 99019 CTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGCGTGTCGA-GAAGAACGCTGA 98961
Query 97055 CTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTT 97114
||||| || ||||||||| || || || || ||| |||| |||| ||||| |||||
Sbjct 98960 CTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCCGACTGCTACGGCGAGGAGTT 98901
Query 97115 TGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGCAC 97173
|||||| |||| |||||||| |||||||| |||| ||| || | || |
Sbjct 98900 TGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGGTCGTGCCTCGA-TCAAGGCCC 98842
Query 97174 GAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232
|||| |||||| | ||||| || ||| ||| |||||||| | |||| ||| ||
Sbjct 98841 -AGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGACTGGCAACCCGTTCATGCTG 98783
Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
|||||||| | || ||||| |||||||| || ||||||||||| |||||
Sbjct 98782 TACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCC 98723
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| ||||||||||| ||| | |||||| | ||||| ||| || || ||| |||
Sbjct 98722 AACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATGAGGTTGCCGTGTGCAACCTG 98663
Query 97353 GCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|| ||| | |||||| |||||| ||
Sbjct 98662 GCTTCGCTGGCTCTGCCGTCGTTTGTCGA 98634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058495993760
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