Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2 114 1e-20 >seq2 Length=1560128 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 |||||| || | |||||||| | ||| ||||||||||| ||| | | ||| ||||| Sbjct 768614 CAGCTGGGCCACGCGGTCGCCAGCCTTGACCTCGAAATCACTGTCGTTGTGGTTAAACAG 768673 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | ||| || | ||||||||||||||| || || ||||| ||||| || || || Sbjct 768674 AAGCACCTTGACTTCGCCGCGGTAGTCGGCATCGATGACGCCGGCGCCGGTATCAATAAA 768733 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||| | || ||||| ||||||||||| | |||||||| Sbjct 768734 GTGCTTGGCGGCAAGGCCTGAGCGGGGAGCAATGCGGCCGT 768774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054001662112