Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 5e-19
>seq5
Length=956377
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| || |||||| ||||||||||| || | | || ||||||| ||||||
Sbjct 899657 TGAAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGACCGTCCTCGAGCTGC 899716
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || |||| | ||||||||| ||| || | || ||||||||| ||| |||
Sbjct 899717 TTGCCGGCGAAAATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTC 899776
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | ||||| |||| |||||| ||| | || ||||| || |||||
Sbjct 899777 GACTTCACATTGTCAATGGTGTCGGATGACTCCACCTCCAGAGTAATGGTCTTGCCGGTA 899836
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
||||| || ||||| ||||||||
Sbjct 899837 AGAGTCTTGACAAAGATCTGCAT 899859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250809816076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |