Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq18 118 1e-21
>seq18
Length=597235
Score = 118 bits (130), Expect = 1e-21
Identities = 363/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || || ||| |||||| |||||||| | ||| || ||||||||||| || ||
Sbjct 244363 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTGGAAAAGGTCAGG 244422
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| || |||||||| ||||| || ||||| || || | || || ||||||
Sbjct 244423 CCGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCAAAGGCGCCGGAGAAGAAG 244482
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGT 33480
|| || || || || |||||||| | || | || || | || || |||
Sbjct 244483 ATGCCCTCGACGGCGGCAAAGGCCACCAGGCGCTGGGCAAAGGTCGACTCGTGGTCGGCA 244542
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||||| | ||||| |||||||| | || || || || || ||||| ||
Sbjct 244543 ATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATGGTGTCGATGGCGTTG 244602
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
|| || ||| | | || || | || || ||||| | || ||| |
Sbjct 244603 AACAGGTAGCTGCGCTGGGCGGGCTCCTTGATGTACGTGTCGATGAGCAGCGAGTACGTC 244662
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| || || ||||| || || ||||| || |||||||| || | ||||| | |||
Sbjct 244663 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGATC 244722
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | || || || ||| || || || || || || || ||| |||
Sbjct 244723 TGGACCTCGCCTGAGAAGCGCTCAACCAGGTTCTCGTTGACAATGCCATCTGAGGCGGCA 244782
Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAA 33777
|| || || | || || || || || ||||||| || || | | || |||||
Sbjct 244783 AAGAAGGCGAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAG 244842
Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 244843 TCGTGGAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGACGCCTCGGCCTTC 244902
Query 33838 TTATACATGTTCCAGAT 33854
|| ||||| | ||||||
Sbjct 244903 TTGTACATCTGCCAGAT 244919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946608200160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |