Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq53 390 3e-103 >seq53 Length=159929 Score = 390 bits (432), Expect = 3e-103 Identities = 1144/1741 (66%), Gaps = 46/1741 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCC-CGGA 363500 ||||| || || || ||||| ||| | |||||||| ||| |||| ||| || | || Sbjct 99514 ATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGCGACAGA 99455 Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCA 363559 || ||| || ||||| || || || || | | || || | ||||| || ||| Sbjct 99454 -GTCGATCGCGTCATTGAGACGTACAACCTCATGTCGAGCAAGT-TCTTCACCCATGCCT 99397 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 |||| || ||| ||| ||||| || | | | ||| |||| |||||||| || | Sbjct 99396 CGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCTTGCTTCCTGGTCG 99337 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || || || ||||| || | || || || |||| |||||| | || | Sbjct 99336 ACATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGATCT 99277 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739 |||||| || || || || ||| | ||||| | || || | | |||| Sbjct 99276 CCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGGCTCGTACA 99217 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 || |||||| || ||| || || | |||||||||| ||||||||| |||| | Sbjct 99216 TTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACA 99157 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 |||| | ||||||||||||||||| |||||| || || ||||| || || || | Sbjct 99156 CTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGG 99097 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA--AAG 363916 |||| || |||||| | |||||||| ||||| || || || || ||||| || ||| Sbjct 99096 AGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAG 99037 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 ||| | || || |||||||| ||| || || ||| | |||||| || ||||||| Sbjct 99036 AGG---TTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGC 98980 Query 363977 GCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | | | | ||| | || | ||||| |||| || || || || | Sbjct 98979 GTGTCGAG--AAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGC 98922 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 ||| | || || || | || || || ||||||||||| || |||||| | Sbjct 98921 CGACTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGG 98862 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 |||| | || || |||||||| |||| ||||| |||| |||||| ||||| Sbjct 98861 TCGTGCCTCGATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGAC 98802 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 || | || | ||| ||||||| || |||||||||||| ||||||| || |||| Sbjct 98801 TGGCAACCCGTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCT 98742 Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 || || | || |||| |||||| || || |||||||| || ||| || || || | Sbjct 98741 GGGCACCA-TCCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATG 98683 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGA 364325 || |||||| || ||||| || ||| | || || ||| ||||||| | |||| Sbjct 98682 AGGTTGCCGTGTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGA 98623 Query 364326 --TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTT----GCAA 364379 |||| ||| |||| | || | || || || || | || || |||| Sbjct 98622 ACGAGTAC----GACTTCCAGAAGCTGCACGAGGTCAC----CAAGGTAGTTGTGCGCAA 98571 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATAT 364439 || || | || ||| || | || || | || || || || || || Sbjct 98570 CCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCCGAGGCGCAGAACAGCAACAT 98511 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 ||| || ||||| |||||| ||||||| |||||||| || || | || || ||| Sbjct 98510 GCGCCACCGCCCTATTGGTGTTGGTGTCCAGGGCCTGGCGGATGCCTTCTTGGCGCTTCG 98451 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 ||| | ||||| ||| | || ||||| || || | | | |||||||| || || || Sbjct 98450 CATGCCTTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCAAATCTTTGAGACCATCTA 98391 Query 364560 TTTTGCCGCAATGACTGCTTCG--TGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACT 364617 || || |||| || ||| | |||| ||| | |||||| ||||||||| Sbjct 98390 CCACGCTGCTCTGACGGCGTCGATGGAGATTGCGCAGGA--GGAGGGAACGTACTCTACG 98333 Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCA 364677 || ||||| || ||| |||| ||||| | | |||||||| | ||||| |||||||| Sbjct 98332 TACGAGGGCTCGCCTGTTTCCCAGGGCATTCTGCAGTTTGACATGTGGAACGTCACGCCC 98273 Query 364678 TCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736 | || ||| |||||| |||| | | | | | ||| |||||||| ||||| Sbjct 98272 AGCGACCTCTGGGACTGGGCATCGCTCAAGGAGC-AGATCAAGCAGCATGGTGTGCGCAA 98214 Query 364737 CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796 ||| || | ||||| ||||| ||||| || | ||||| || || |||||||| Sbjct 98213 CTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGA 98154 Query 364797 GTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCC 364856 ||||||||| |||| ||| ||| |||| ||||| || || | || || || | Sbjct 98153 GTGCTTCGAGCCGTATACTTCCAACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTCCA 98094 Query 364857 GGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCAT 364916 ||| || || || || | || | |||| || |||||| || | ||| Sbjct 98093 GGTTGTCAACCCGTGGCTGCTGCGCGACTTGGTGGACCTGGGTCTGTGGTCGGATAACAT 98034 Query 364917 GAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGA 364976 ||||||| ||||| || | || || || | ||||||||||| | | || || || Sbjct 98033 GAAGAACCGCATCATTGCGGAGAACGGGTCGATCCAGAACATTCCCAGCATCCCCGATGA 97974 Query 364977 TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGC 365036 | ||| | ||||| || || ||||| ||||| ||| || | | | ||||| Sbjct 97973 CATCAAGATGCTGTACAAGACGGTGTGGGAGATTTCGCAGCGCACGGTTGTGCAGATGGC 97914 Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096 ||||| ||||| || || || ||| |||||| | ||| | ||||| | || Sbjct 97913 TGCCGACCGCGGAGCGTTCATTGACCAGTCGCAGTCGCTCAACATCCACATGAAGGACCC 97854 Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAG 365155 ||| | |||| |||| |||||| || | |||| ||||| ||||| ||||| | Sbjct 97853 TACCATGGGCAAGATTACCAGCATGCACTT-TGCGGGCTGGAAGCTGGGTCTCAAGACGG 97795 Query 365156 G 365156 | Sbjct 97794 G 97794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352330859432