Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq53 390 3e-103
>seq53
Length=159929
Score = 390 bits (432), Expect = 3e-103
Identities = 1144/1741 (66%), Gaps = 46/1741 (3%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCC-CGGA 363500
||||| || || || ||||| ||| | |||||||| ||| |||| ||| || | ||
Sbjct 99514 ATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGCGACAGA 99455
Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGCCA 363559
|| ||| || ||||| || || || || | | || || | ||||| || |||
Sbjct 99454 -GTCGATCGCGTCATTGAGACGTACAACCTCATGTCGAGCAAGT-TCTTCACCCATGCCT 99397
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|||| || ||| ||| ||||| || | | | ||| |||| |||||||| || |
Sbjct 99396 CGCCCACGCTGTTCAACGCTGGTACGCCCCAGGCCCAGCTGTCGTCTTGCTTCCTGGTCG 99337
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || || || ||||| || | || || || |||| |||||| | || |
Sbjct 99336 ACATGAAGGAGGACTCGATTGAGGGCATTTACGATACCCTCAAGACCTGTGCTATGATCT 99277
Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739
|||||| || || || || ||| | ||||| | || || | | ||||
Sbjct 99276 CCAAGATGGCGGGTGGTATCGGTCTCAATGTCCACCGCATCCGCGCCACGGGCTCGTACA 99217
Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799
|| |||||| || ||| || || | |||||||||| ||||||||| |||| |
Sbjct 99216 TTGCCGGCACCAACGGTACCTCCAACGGCATCATTCCCATGCTGCGTGTGTTTAACAACA 99157
Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859
|||| | ||||||||||||||||| |||||| || || ||||| || || || |
Sbjct 99156 CTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTGG 99097
Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA--AAG 363916
|||| || |||||| | |||||||| ||||| || || || || ||||| || |||
Sbjct 99096 AGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAAG 99037
Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976
||| | || || |||||||| ||| || || ||| | |||||| || |||||||
Sbjct 99036 AGG---TTCGCGCCCGTGATCTTTTCCTGGCTCTGTGGATCCCTGACCTGTTCATGAAGC 98980
Query 363977 GCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
| || ||| | | | | | ||| | || | ||||| |||| || || || || |
Sbjct 98979 GTGTCGAG--AAGAACGCTGACTGGACTCTGATGTGCCCCAACGAGTGCCCTGGCCTGGC 98922
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
||| | || || || | || || || ||||||||||| || |||||| |
Sbjct 98921 CGACTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAAAAGTACGAGCAGGAGGGCCGCGG 98862
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
|||| | || || |||||||| |||| ||||| |||| |||||| |||||
Sbjct 98861 TCGTGCCTCGATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCGCAGACCGAGAC 98802
Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214
|| | || | ||| ||||||| || |||||||||||| ||||||| || ||||
Sbjct 98801 TGGCAACCCGTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCT 98742
Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273
|| || | || |||| |||||| || || |||||||| || ||| || || || |
Sbjct 98741 GGGCACCA-TCCGCAGCTCCAACCTGTGCACGGAGATTATCGAGTACTGTGCGCCGGATG 98683
Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGA 364325
|| |||||| || ||||| || ||| | || || ||| ||||||| | ||||
Sbjct 98682 AGGTTGCCGTGTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGA 98623
Query 364326 --TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTT----GCAA 364379
|||| ||| |||| | || | || || || || | || || ||||
Sbjct 98622 ACGAGTAC----GACTTCCAGAAGCTGCACGAGGTCAC----CAAGGTAGTTGTGCGCAA 98571
Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATAT 364439
|| || | || ||| || | || || | || || || || || ||
Sbjct 98570 CCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCCGAGGCGCAGAACAGCAACAT 98511
Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499
||| || ||||| |||||| ||||||| |||||||| || || | || || |||
Sbjct 98510 GCGCCACCGCCCTATTGGTGTTGGTGTCCAGGGCCTGGCGGATGCCTTCTTGGCGCTTCG 98451
Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
||| | ||||| ||| | || ||||| || || | | | |||||||| || || ||
Sbjct 98450 CATGCCTTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACGCAAATCTTTGAGACCATCTA 98391
Query 364560 TTTTGCCGCAATGACTGCTTCG--TGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACT 364617
|| || |||| || ||| | |||| ||| | |||||| |||||||||
Sbjct 98390 CCACGCTGCTCTGACGGCGTCGATGGAGATTGCGCAGGA--GGAGGGAACGTACTCTACG 98333
Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCA 364677
|| ||||| || ||| |||| ||||| | | |||||||| | ||||| ||||||||
Sbjct 98332 TACGAGGGCTCGCCTGTTTCCCAGGGCATTCTGCAGTTTGACATGTGGAACGTCACGCCC 98273
Query 364678 TCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736
| || ||| |||||| |||| | | | | | ||| |||||||| |||||
Sbjct 98272 AGCGACCTCTGGGACTGGGCATCGCTCAAGGAGC-AGATCAAGCAGCATGGTGTGCGCAA 98214
Query 364737 CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796
||| || | ||||| ||||| ||||| || | ||||| || || ||||||||
Sbjct 98213 CTCGCTGCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGA 98154
Query 364797 GTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCC 364856
||||||||| |||| ||| ||| |||| ||||| || || | || || || |
Sbjct 98153 GTGCTTCGAGCCGTATACTTCCAACATTTACCAGCGCCGTGTGCTGGCTGGCGAGTTCCA 98094
Query 364857 GGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCAT 364916
||| || || || || | || | |||| || |||||| || | |||
Sbjct 98093 GGTTGTCAACCCGTGGCTGCTGCGCGACTTGGTGGACCTGGGTCTGTGGTCGGATAACAT 98034
Query 364917 GAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGA 364976
||||||| ||||| || | || || || | ||||||||||| | | || || ||
Sbjct 98033 GAAGAACCGCATCATTGCGGAGAACGGGTCGATCCAGAACATTCCCAGCATCCCCGATGA 97974
Query 364977 TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGC 365036
| ||| | ||||| || || ||||| ||||| ||| || | | | |||||
Sbjct 97973 CATCAAGATGCTGTACAAGACGGTGTGGGAGATTTCGCAGCGCACGGTTGTGCAGATGGC 97914
Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096
||||| ||||| || || || ||| |||||| | ||| | ||||| | ||
Sbjct 97913 TGCCGACCGCGGAGCGTTCATTGACCAGTCGCAGTCGCTCAACATCCACATGAAGGACCC 97854
Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAG 365155
||| | |||| |||| |||||| || | |||| ||||| ||||| ||||| |
Sbjct 97853 TACCATGGGCAAGATTACCAGCATGCACTT-TGCGGGCTGGAAGCTGGGTCTCAAGACGG 97795
Query 365156 G 365156
|
Sbjct 97794 G 97794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352330859432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |