Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 1e-18
>seq9
Length=878609
Score = 107 bits (118), Expect = 1e-18
Identities = 198/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259
||||||||| ||||| ||||| ||| | ||||| |||| || ||||| ||||||||
Sbjct 510615 GTTCTACCGGTACAAGATGCCCCGCCTTCAGACCAAGATCGAAGGCAAGGGTAACGGTAT 510556
Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319
|| || ||| | |||||| || | | ||||| || |||| | || |||| | |
Sbjct 510555 CAAGACTGTCGTCGTCAACCTGTCGGCCGTCGCCCAGTCGCTGGCCCGTCCTGGTGCTCA 510496
Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGA 6379
|| || || || || || | || || || || ||||| | |||| | | ||||
Sbjct 510495 CCTGATCAAGTACTTTGGATTTGAGCTGGGTGCCCAGACCAACATTGACCCCGCCGACGA 510436
Query 6380 GCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTAC-TTGACGGCT 6438
|||| ||| | || || ||||| | | ||||||||||| | || | ||||||
Sbjct 510435 CCGCTGGATCATCAATGGCTCGCACGATACCAAGAAGCTGCAGGA-TCACGTCTACGGCT 510377
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486
| ||| ||||||||| ||||| | | ||| | ||||| |||||||
Sbjct 510376 TCATTGTCAAGTTTGTTCTGTGCAAGAAGTGCAAGAACCCCGAGACCG 510329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946889755156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |